Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (375), Expect = 6e-41
 Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 8/226 (3%)

Query: 1   MLQLIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSG 60
           +LQ+  + K Y DGD    VL   +L + +G+QLA++G SGSGKSTLL+++  LD   +G
Sbjct: 27  LLQVQAVSKSYHDGDVTTQVLSEVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSAG 86

Query: 61  EIWFPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPE----- 115
           ++   G  ++  S   +   R  ++G I+Q ++LLP  +  +N+     ++G        
Sbjct: 87  KVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGRDRAQAQA 146

Query: 116 DAGLWRQILSALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNA 175
           DA   + +L  + L   +   P E+SGG++QR AIARAL  +PK++LADEPTG+LD ++ 
Sbjct: 147 DA---KVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSG 203

Query: 176 EAVMRLLTTLTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQLHVMA 221
           EAV  L+  L  QL  A ++VTH  K+A  MD  + ++ G L  +A
Sbjct: 204 EAVYELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQAVA 249