Pairwise Alignments

Query, 836 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 826 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  349 bits (895), Expect = e-100
 Identities = 264/827 (31%), Positives = 418/827 (50%), Gaps = 32/827 (3%)

Query: 25  VKALLGHYRRYPLQICLVWLGLTLGVSLLVGVTAINHHARQSYEHGEKLFSNPLPYRIRS 84
           ++ALL H+RR+P+Q   V  GL L  +LL GV A+N  AR+SY+   +L       RI +
Sbjct: 8   LRALLSHWRRHPVQFFSVLTGLWLATALLTGVQALNSQARESYQRASQLIGGEPQTRITA 67

Query: 85  KHIANKIPQGLYIQLRRDGFQQCVPFDDYRFSTTSGLD--LILQGIDPVALL--SIDNGK 140
                  PQ L+I+LRR+G+    P    R       D  L L GI+PV L   S   G+
Sbjct: 68  SS-GGLFPQALFIELRREGWPVS-PMLQGRIVLQGREDRRLQLMGIEPVTLPTGSALAGQ 125

Query: 141 PLAQQSGLQLMNPPYPVMVSQELAKLQDWQEGDYIALTDGSQLGPIVIDRHNQVTGMRVV 200
            L  +  +  + PP    ++ +  +    +EG       G  L P+   + +   G+ ++
Sbjct: 126 TLNAEQVVDFLTPPGMTWIAPQTLQALGLEEGQQPLTETGVALPPLRA-KPDMAPGV-LL 183

Query: 201 ADLSLVRMLKKGSGLTVIACADMPPAKLDKLKKSLPNGLTLTRSTRSE--LESLTQAFHL 258
            D+   + L   SG           A+ + +  +  N L + + +  E  LE LT++FHL
Sbjct: 184 TDIGFAQPLLGQSGQLSEMLLAKDFARQNPVLPAALNDLLVIKKSGEENNLERLTESFHL 243

Query: 259 NLTAMGMLAFLVGIFIFYQAMSLSMVQRQPLVGTLRQIGVNGWQLAKALLIELLVLVLVS 318
           NL A+G+L+F+VG+FI + A+ L++ QR+ L+  LR  GV+   L  AL +EL  L L+ 
Sbjct: 244 NLNALGVLSFIVGLFIVHAAIGLALEQRRGLLRNLRACGVSARLLIAALGVELGALALLG 303

Query: 319 WVCGNVLGLLLANQLIPSVASSLGYLYNANV----DLAIGWDWSWSSYSLLMALLAAFAS 374
            V G V G LLA+ L+P VA+SL  LY A V    +L++ W  S    SLL ALLA   S
Sbjct: 304 GVFGVVSGYLLASLLLPDVAASLRGLYGAEVAGQLNLSLWWWLSGIGLSLLGALLAGANS 363

Query: 375 CTWPLVRLLRSQPIRLSARLSLVRFAGKEFKLQALLACALCVAAVAIYQAPKSQQSGFAI 434
               L+R  R   + L+   +  +   +  + QA +A    V  V+      S   GF +
Sbjct: 364 ----LLRAARLPLLALADAQAWQQAHARWLQRQAWVAVLGAVVGVSALVFGTSLMLGFVM 419

Query: 435 IGLMLLSVALFTPYIIWTLFTSFSYTLRWVKVRWFFADAAASMSYRGVATMAFMVALAAN 494
           +  +LLS AL  P ++  +        R V  +WF AD    +    +A MA ++A+AAN
Sbjct: 420 MSALLLSAALALPVLLDAMLGGLLKRSRSVLGQWFVADCRQQLPALSLALMALLLAMAAN 479

Query: 495 IGVETMVGSFRDTTDRWLSQRLAADIYLYPSN-SVASRMSQWLGQQPEVDAVWWRWEKDF 553
           IG  +M   FR T + WL QRL A++Y+ P N   A  ++ WL QQP+V AV   W+   
Sbjct: 480 IGAGSMTSGFRQTFNSWLEQRLTAELYVSPQNPEQAGPLNTWLNQQPDVGAVLPNWQVPV 539

Query: 554 ASQQGPVQIVSTGASDGEL-----DSLTVKLGVPNYWYHLHHARGVMISESMALKLGIRP 608
             Q  P  +   G  D  +       L    G P  W  L     VM+SE +A +L +  
Sbjct: 540 QVQGWPADLF--GVIDHSIYRQHWALLESVAGDP--WNVLRDEDTVMLSEQLARRLQLGL 595

Query: 609 GDLIDLPEPMGSGWA--VFGVYYDYGNPYHQVMMSHQNWMKAFAGTGNVALAVVLKEGLT 666
            D + +P P G  W   + G+Y DYGNP   ++++ ++ +  +  +  V   + + +   
Sbjct: 596 QDTLSIPVPNGK-WTPRIVGIYADYGNPKGHLLVNEKHLLAHWPQSMPVRFNLRVDQAAI 654

Query: 667 GESVKKRLDTIFRLDADRIFDNTNIHSHAMRVFDRTFSIAGTLGNITLFIAVCGIFFSTL 726
             S+  RL   F+LD + I D + +   + +VF+RTF+    L ++TL +A   +F S L
Sbjct: 655 -PSLVTRLQARFKLDDNHIIDQSQLKGWSSQVFERTFAATAALNSLTLGVAGVALFISLL 713

Query: 727 AGETSRLRHISLLRCLGVSGKELVLIGGMQLFVFGAISLLIALPLGLTLAKLVIDVVIKH 786
               SRL  ++ L  LGV+ ++L+L+   Q ++   ++L++ALPLGL LA  +  V+   
Sbjct: 714 TQSQSRLGQLAPLWALGVTRRQLMLLNLGQTWLLAVLTLVLALPLGLLLAWCLDAVINVR 773

Query: 787 SFGWTMQLQMVPGEYVYTVVWSMMALILAGALPIIRLARKSPMKSLR 833
           +FGW + LQ+ P + +  +  +M+A +LA A P+++L R  P   LR
Sbjct: 774 AFGWRLPLQVFPLQLLQLMALAMLATLLASAWPLLKLYRSRPADLLR 820