Pairwise Alignments

Query, 836 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 819 a.a., putative lipoprotein transport protein from Phaeobacter inhibens DSM 17395

 Score =  283 bits (723), Expect = 4e-80
 Identities = 232/828 (28%), Positives = 393/828 (47%), Gaps = 29/828 (3%)

Query: 20  MLWPVVKALLGHYRRYPLQICLVWLGLTLGVSLLVGVTAINHHARQSYEHGEKLFSNPLP 79
           M+     A+L H+R +PLQ+ ++  GL L  +L   V AIN  AR SY       S    
Sbjct: 1   MIGATFSAILSHWRLHPLQLAMLVTGLALATALWSAVQAINAEARASYAEAAARISPSGQ 60

Query: 80  YRIRSKHIANKIPQGLYIQLRRDGFQQCVPFDDYRFSTTSGL---DLILQGIDPVA--LL 134
             + +++    I  G Y++LRR+G+Q            T+     D+ + GID ++  ++
Sbjct: 61  TYLTNQN--GYIKLGQYVELRREGWQLSPVLIGTLTEDTAEAGPADIEVIGIDILSHPMM 118

Query: 135 SIDNGKPLAQQSGLQLMNPPYPVMVSQELAKLQDWQEGDYIALTDGSQLGPIVIDRHNQV 194
           +       + + G Q    P  ++++     L    + D   L+    L P+   R   V
Sbjct: 119 ARLAATDTSSEEGAQEALTPADLLLAP--GHLFAHPDSDLDLLS--RNLPPVT--RTTTV 172

Query: 195 TGMRVVADLSLV-RMLKKGSGLTVIACADMPPAKLDKLKKSLPNGLTLTRSTRSELESLT 253
               V+ D+S V R+L K   ++ +   D  P  L  L +  P+    T ST ++   LT
Sbjct: 173 PRDVVIGDISTVARLLGKPFLISRLVVLDEQPIGLRPLSELAPHLRLQTASTGADTAQLT 232

Query: 254 QAFHLNLTAMGMLAFLVGIFIFYQAMSLSMVQRQPLVGTLRQIGVNGWQLAKALLIELLV 313
           ++FHLNLTA G+L+F VG+FI    ++L + QR+ L  TLR +GV    L   +  ELLV
Sbjct: 233 RSFHLNLTAFGLLSFAVGLFIVQGTIALGIEQRRGLFRTLRSLGVPLNTLVGLIFAELLV 292

Query: 314 LVLVSWVCGNVLGLLLANQLIPSVASSLGYLYNANVD--LAIGWDWSWSSYSLLMALLAA 371
           + +++ + G  LG L+A  L+P V ++L  LY A++D  L +   W +S  ++ +A +A 
Sbjct: 293 ITILAALLGLFLGYLIAAALLPGVGATLSGLYGASLDGSLQLRLGWVFSGLAMALAGMAL 352

Query: 372 FASCTWPLVRLLRSQPIRLSARLSLVRFAGKEFKLQALLACALCVAAVAIYQAPKSQQSG 431
             + +W  V L R   +   A  +  + A +  +L AL    L + A A+        +G
Sbjct: 353 AGAQSW--VSLSRLPILAAPAAAARGQQALRGHRLSALSGALLVLGAAAMPALFDGLLAG 410

Query: 432 FAIIGLMLLSVALFTPYIIWTLFTSFSYTLRWVKVRWFFADAAASMSYRGVATMAFMVAL 491
           FA +  ++L  AL  P  +  L +      R     W +AD  A +    +A MA ++AL
Sbjct: 411 FAFLAGLMLGAALLLPLALSRLASVGVQLARRPVTLWLWADMRAQLPGLSLALMALLLAL 470

Query: 492 AANIGVETMVGSFRDTTDRWLSQRLAADIYL-YPSNSVASRMSQWLGQQPEVDAVWWRWE 550
           A NIGV TMV SFR T   WL QRLA+++Y+  P   +A  +  WL  +          +
Sbjct: 471 ATNIGVGTMVSSFRLTFLGWLDQRLASELYMTLPQEDMAHDVLPWLADRGIRALPIRHSD 530

Query: 551 KDFASQQG---PVQIVSTGASDGELDSLTVKLGVPNYWYHLHHARGVMISESMALKLGIR 607
           + +   +G   P+++          D+  +    P  W  L   RG +I+E +A +  + 
Sbjct: 531 ERYVGTEGTGAPMEVYGVVDDATYRDNWPLLQAEPTVWQQLAEGRGALINEQLARRADLG 590

Query: 608 PGDLIDLPEPMGSGW--AVFGVYYDYGNPYHQVMMSHQNWMKAFAGTGNVALAVVLKEGL 665
           PGD +     +   W   + GVY DYGNP  Q ++  +  +       N    + L    
Sbjct: 591 PGDTL----MIAPDWRMQIAGVYSDYGNPNPQAIVGLETLLLHRPSIENRRFGLRLPPAD 646

Query: 666 TGESVKKRLDTIFRLDADRIFDNTNIHSHAMRVFDRTFSIAGTLGNITLFIAVCGIFFST 725
             E V+  L   F L      D + + + ++ +FDRTF + G L  +T  +A   +  S 
Sbjct: 647 VAE-VRAVLQREFGLPRSAFIDQSALKAQSLAIFDRTFVVTGALNLLTFGVAGFAMLTSL 705

Query: 726 LAGETSRLRHISLLRCLGVSGKELVLIGGMQLFVFGAISLLIALPLGLTLAKLVIDVVIK 785
           L   + RL  ++ +  +G++  +L     ++  +   ++ L+ALPLGL L   ++ VV  
Sbjct: 706 LTLWSQRLPQLAPIWAMGLTRGQLARYEILRSVILAGLTALLALPLGLLLGWALLAVVNV 765

Query: 786 HSFGWTMQLQMVPGEYVYTVVWSMMALILAGALPIIRLARKSPMKSLR 833
            +FGW + + + P +++  ++ +++A  LA ALP  RL++  P   LR
Sbjct: 766 EAFGWRLPMSLFPLDWLQLLLMALIAAALAAALPARRLSKLKPADLLR 813