Pairwise Alignments

Query, 836 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., Probable adhesion component transport transmembrane protein ABC transporter from Mycobacterium tuberculosis H37Rv

 Score =  221 bits (562), Expect = 2e-61
 Identities = 209/856 (24%), Positives = 385/856 (44%), Gaps = 56/856 (6%)

Query: 23  PVVKALLGHYRRYPLQICLVWLGLTLGVSLLVGVTAINHHARQSYEHGEKLFSNPLPYRI 82
           P+ +      R+ P Q  L+ LG+ LGV+++V +   ++ A+++++      +    +R+
Sbjct: 11  PLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAAAITGKSTHRL 70

Query: 83  RSKHIANKIPQGLYIQLRRDGFQQCVP-FDDYRFSTTSGLDLI-LQGIDPVALLSIDN-- 138
            S      + Q LY+ LRR G+    P  + Y  +   G   +   G DP A  +  +  
Sbjct: 71  VSGPAG--VDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFRSPL 128

Query: 139 --GKPLAQQSGLQLMNPPYPVMVSQELAKLQDWQEGDYIALTDGSQLGPIVI-------- 188
              + +A+  G   +  P  V++S+++A+      GD IAL        + +        
Sbjct: 129 WSNQNIAELGGF--LTRPNGVVLSRQVAQKYGLAVGDRIALQVKGAPTTVTLVGLLTPAD 186

Query: 189 DRHNQVTGMRVVADLSLVRMLKKGSG-LTVIACADMPPAKLDKLKKSLPNGLTLTRST-- 245
           +  NQ     ++AD+S  + L    G L+ I       A   ++++ LP G+ +  S   
Sbjct: 187 EVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRMETSDTQ 246

Query: 246 RSELESLTQAFHLNLTAMGMLAFLVGIFIFYQAMSLSMVQRQPLVGTLRQIGVNGWQLAK 305
           R  ++ +T AF +NLTA+ ++A LVGIF+ Y  ++ ++VQR+P    LR +GV   QL  
Sbjct: 247 RDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFW 306

Query: 306 ALLIELLVLVLVSWVCGNVLGLLLANQLIPSVASSLGYLYNANVDLAIGWDWSWSSYSLL 365
            ++ E LV  L+    G ++G+ L   LI  V  ++   Y       +          L+
Sbjct: 307 LIMTESLVAGLIGTGLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAESLLKGLI 366

Query: 366 MALLAAFASCTWPLVRLLRSQPIRLSARLSLVRFAGKEFKLQALLACA---LCVAAVAIY 422
           + + AA  +   P +  +R+ P     R SL     K  KL   L  A   L    V + 
Sbjct: 367 IGIFAAMLATLPPAIEAMRTVPASTLRRSSL---ESKITKLMPWLWVAWFGLGSFGVLML 423

Query: 423 QAPKSQQSGFAIIGL--MLLSVALFTP----YIIWTLFTSFSYTLRWVKVRWFFADAAAS 476
             P +     A +GL  +L+++AL  P    +++  L       L  +  R    +   S
Sbjct: 424 WLPGNNLV-VAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIG-RMAPRNIVRS 481

Query: 477 MSYRGVATMAFMVALAANIGVETMVGSFRDTTDRWLSQRLAADIYLYPSNSVASR----- 531
           +S   +A  A M+A++  +GV   VGSFR T   WL   L +D+Y+ P    + R     
Sbjct: 482 LSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGNL 541

Query: 532 -------MSQWLGQQPEVDAVWWRWEKDFASQQG---PVQIVSTGASDGELDSLTVKLGV 581
                  +S+W G +   DAV  R+   FA   G    +  VS   SDG+     +    
Sbjct: 542 PVDAVRNISKWPGVR---DAVMARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNK 598

Query: 582 PNYWYHLHHARGVMISESMALK--LGIRPGDLIDLPEPMGSGWAVFGVYYDYGNPYHQVM 639
              W      +GVM+SE M  +  L + P  +  + +     + V  V+ DY +    ++
Sbjct: 599 DTLWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQTFPVLAVFSDYTSDQGVIL 658

Query: 640 MSHQNWMKAFAGTGNVALAVVLKEGLTGESVKKRLDTIFRLDADRIFDNTN-IHSHAMRV 698
           M   ++   +       + + L  G    ++  +L   F    D +  +T+ +   +M +
Sbjct: 659 MDRASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMFI 718

Query: 699 FDRTFSIAGTLGNITLFIAVCGIFFSTLAGETSRLRHISLLRCLGVSGKELVLIGGMQLF 758
           FDR+F+I   L  +   +A  G+  + ++ E  R   + + R +G++ ++L  +  ++  
Sbjct: 719 FDRSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETG 778

Query: 759 VFGAISLLIALPLGLTLAKLVIDVVIKHSFGWTMQLQMVPGEYVYTVVWSMMALILAGAL 818
           + G ++ L+ALP G  LA +++ ++   SFGWT+Q+      ++  ++ +++A + AG  
Sbjct: 779 LMGGMAGLMALPTGCILAWILVRIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMY 838

Query: 819 PIIRLARKSPMKSLRE 834
           P  RL R +   ++RE
Sbjct: 839 PAWRLGRMTIRTAIRE 854