Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Na+/H+ antiporter NhaA type from Pseudomonas fluorescens FW300-N2E2

 Score =  404 bits (1037), Expect = e-117
 Identities = 205/373 (54%), Positives = 263/373 (70%), Gaps = 8/373 (2%)

Query: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHTYVFGM--------SVSHWINDGL 59
           FF++E+A G+LL+ AA +A+ I NS +   Y   L T V            +  WINDGL
Sbjct: 10  FFQLEAASGLLLIAAAVLALAINNSPLSWLYNGLLDTPVVAQVGALKIAKPLLLWINDGL 69

Query: 60  MAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGWA 119
           MA+FFLLIGLEVKRE+L+G L      + P  AA+GGM+ PALIY   N ++PAA+ GWA
Sbjct: 70  MAMFFLLIGLEVKREVLDGQLSKPSQIVLPGAAAIGGMVVPALIYWFLNRDNPAALAGWA 129

Query: 120 IPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTIG 179
           IP ATDIAFALG++ALLGKRVPVSLK+FL+ LAIIDDLG ++IIA+FYS  LS+++L + 
Sbjct: 130 IPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIIIAIFYSGALSSLSLILA 189

Query: 180 FIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKGNKGEHS 239
                 L  +N   V KL  Y+V GLILW+ VLKSGVHATLAGV + F IPL+    E S
Sbjct: 190 ATCIAALVAMNRMGVVKLGPYMVVGLILWVCVLKSGVHATLAGVTLAFCIPLRTKNAETS 249

Query: 240 PLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIFS 299
           PL  LEHALHP+VA+ ILP+FAFANAG+SL GV++   T  +P+G+A+GL LGK +G+F 
Sbjct: 250 PLLTLEHALHPWVAYGILPLFAFANAGLSLSGVTVESFTHHVPMGIAIGLLLGKTVGVFG 309

Query: 300 FSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGIL 359
            +W AVK+G+A LP G N+  +  V++LCGIGFTMS+F+ SLAF      Y    R+GIL
Sbjct: 310 LTWLAVKIGIASLPLGANWGQVLGVAILCGIGFTMSLFVGSLAFEPGVSDYAGMDRMGIL 369

Query: 360 MGSTTAALLGYSL 372
            GS  AALLGY++
Sbjct: 370 TGSILAALLGYAV 382