Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., sodium/proton antiporter, NhaA family from Pseudomonas syringae pv. syringae B728a

 Score =  404 bits (1037), Expect = e-117
 Identities = 207/371 (55%), Positives = 270/371 (72%), Gaps = 2/371 (0%)

Query: 5   IRDFFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHTYVFGMSVSHWINDGLMAVFF 64
           I  FF  ESAGG++L+ AA  A+++ANS +G+ Y A LH    G+SVSHWINDGLMA+FF
Sbjct: 17  ITRFFAAESAGGLVLMAAALAALIVANSPLGDSYFAALHAVFAGLSVSHWINDGLMAIFF 76

Query: 65  LLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGWAIPAAT 124
           +L+GLE+KRE+L G L S      P  AA+GGML PALIYVAFN+  P  I GWAIPAAT
Sbjct: 77  MLVGLEIKREVLAGQLASWSQRALPGFAALGGMLVPALIYVAFNWGRPDTIGGWAIPAAT 136

Query: 125 DIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTIGFIMTG 184
           DIAFALG+++LLGKRVP+SLK+FL ALAI+DDLG V+IIALFY+SDLS   L        
Sbjct: 137 DIAFALGVLSLLGKRVPLSLKIFLSALAILDDLGAVLIIALFYTSDLSIPMLLAALGSIA 196

Query: 185 VLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPL-KGNKGEHSPLKH 243
           +L  LN   V KL  YL+ G +LW  +L+SG+HATLAGV +   IPL K ++   SPL H
Sbjct: 197 MLVALNRLGVKKLLPYLIVGALLWFFMLQSGIHATLAGVALALCIPLGKPDEEARSPLLH 256

Query: 244 LEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIFSFSWA 303
           LE  LHP+VAFA++P+F FANAG+SL G++   L   +PLGVALGL +GK +GIF+ +  
Sbjct: 257 LEEKLHPWVAFAVVPIFGFANAGVSLSGITADTLVDPVPLGVALGLLVGKQVGIFAMAAL 316

Query: 304 AVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGILMGST 363
           A++ G+A+LP+G N+  ++ V+ LCGIGFTMS+FI +LAF  A E  D   ++G+L+GS 
Sbjct: 317 AIRAGLARLPDGSNWGQLYGVAALCGIGFTMSLFIGALAFPGAPELVDE-VKVGVLIGSV 375

Query: 364 TAALLGYSLLR 374
            +A+LG  +LR
Sbjct: 376 LSAVLGVVVLR 386