Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., Na+/H+ antiporter NhaA (NCBI) from Rhodospirillum rubrum S1H

 Score =  375 bits (963), Expect = e-108
 Identities = 195/387 (50%), Positives = 267/387 (68%), Gaps = 15/387 (3%)

Query: 5   IRDFFKMESAGGILLVIAAAIAMVIANSAMGEGY-QAFLHTYVFGMS-------VSHWIN 56
           I  F +++ A G++LV AA +A++ ANS     Y Q F   +V G         +  WIN
Sbjct: 6   IVSFLRLDIAAGVILVGAAVLALIAANSPAAALYEQVFQTPFVIGYGPWLLEKPLLLWIN 65

Query: 57  DGLMAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQ 116
           DGLMAVFFLL+GLE+KRE+  G L +   A  PA+AAVGGM+ PALIY +  + D  A++
Sbjct: 66  DGLMAVFFLLVGLEIKREVRGGELSTPRLAALPAVAAVGGMVVPALIYASLTWGDAFALR 125

Query: 117 GWAIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIAL 176
           GWAIPAATDIAFALGI+ LLG RVP+SLK+FL ALAIIDDLG ++IIA FY++ LS +AL
Sbjct: 126 GWAIPAATDIAFALGILTLLGPRVPISLKIFLTALAIIDDLGAILIIAFFYTASLSPLAL 185

Query: 177 TIGFIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKGNKG 236
            +      +L  LN     +L  YL+ G++LW+ VLKSGVHATLAGVV+   IPL     
Sbjct: 186 LLAAACLALLIGLNLSGQRRLWPYLLIGVVLWVCVLKSGVHATLAGVVLALTIPLGATDD 245

Query: 237 EHS----PLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLG 292
           E +    PL+ LEH LHP+V +AILP+FAFANAG+SL G+  + L + +PLG+ LGLFLG
Sbjct: 246 ESASADKPLERLEHGLHPWVTYAILPLFAFANAGVSLAGLPPSALLAPVPLGIVLGLFLG 305

Query: 293 KPLGIFSFSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEA--- 349
           K +G+F FSW A++ G+A +P+G  ++ ++ V+++ G+GFTMS+FI +LAF  ++     
Sbjct: 306 KQIGVFGFSWLAIRSGLAPMPQGARWRDLYGVALITGVGFTMSLFIGTLAFETSDPLAAD 365

Query: 350 YDTYARLGILMGSTTAALLGYSLLRLS 376
           + T  RLG+L GS  + ++GY +LRLS
Sbjct: 366 FGTEVRLGVLSGSLLSGVIGYLVLRLS 392