Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Na+/H+ antiporter NhaA (RefSeq) from Shewanella sp. ANA-3

 Score =  442 bits (1138), Expect = e-129
 Identities = 243/388 (62%), Positives = 286/388 (73%), Gaps = 9/388 (2%)

Query: 1   MSDMIRDFFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHTYV---FGMSVSH---- 53
           M   IR+F   ESAGGILL++A  +AM++ANS +   YQ FL T V    G    H    
Sbjct: 1   MEKAIRNFLSQESAGGILLLVAVVLAMLMANSPLAGLYQGFLGTEVQVRVGALDLHKPLL 60

Query: 54  -WINDGLMAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDP 112
            WINDGLMA+FFLLIGLEVKRELLEGAL S   A  P  AA+GGML PA IY+ FN+ DP
Sbjct: 61  LWINDGLMALFFLLIGLEVKRELLEGALSSVAQASLPTFAAIGGMLVPAGIYLLFNYGDP 120

Query: 113 AAIQGWAIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLS 172
               GWAIPAATDIAFALGIMALLG RVPV+LKVFLLALAIIDDLGV+VIIALFYSSDLS
Sbjct: 121 VTQVGWAIPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVIVIIALFYSSDLS 180

Query: 173 TIALTIGFIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLK 232
           TI+L I  I    L  LN K VT L+ Y V GL+LW+AVLKSGVHATLAGV+I F IPL+
Sbjct: 181 TISLIIASIAIVGLVALNRKGVTALAPYGVLGLVLWVAVLKSGVHATLAGVIIAFCIPLR 240

Query: 233 GNKGEHSPLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLG 292
              G  SP +HLEH+LHP+  F ILPVFAFANAG++L  +SL  L S +P+G+ALGL LG
Sbjct: 241 AKDGS-SPSEHLEHSLHPWSTFLILPVFAFANAGVALGNMSLDALISPVPVGIALGLMLG 299

Query: 293 KPLGIFSFSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDT 352
           KP+G+  FS+ AVKL +A+LP+GI +K I  V+ +CGIGFTMS+FI+SLAF QA+  +  
Sbjct: 300 KPIGVMLFSYVAVKLKLAQLPDGIGWKQIAPVAAMCGIGFTMSMFIASLAFEQADPMFGD 359

Query: 353 YARLGILMGSTTAALLGYSLLRLSLPLK 380
            ARLG L+GS  AAL+GY  L   LP K
Sbjct: 360 LARLGTLIGSILAALIGYFWLSKVLPKK 387