Pairwise Alignments

Query, 387 a.a., carboxynorspermidine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., diaminopimelate decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 123 HLVEGK----ASLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFD--------S 170
           +LV G+    A + LR+NP V        +   + ++ G+  D   E+VF          
Sbjct: 134 NLVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEA-EAVFARAHALPHLQ 192

Query: 171 INGVMFHMNCENKDVDAFIGLLDAISERFGRYLDK---LDWVSLGGGVFFTW----PGYD 223
           + GV  H+  +  ++  F+  +D +     R  ++   ++   +GGG+  T+    P + 
Sbjct: 193 VKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHP 252

Query: 224 VEKLGAALKAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKT-AIVDSA 277
                A LK    R  ++L  EPG AI       V  V+ + EN  K  AIVD A
Sbjct: 253 DVYAAALLKRLGHRK-LKLIFEPGRAIAANAGIFVTEVLYLKENSDKRFAIVDGA 306