Pairwise Alignments

Query, 212 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., outer membrane protein OprF from Marinobacter adhaerens HP15

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 50  DDDRDGVINARDLCP--DTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPAFLTQ 107
           D D DGV + +D C   D  + +E+D+ GC   VK+ + + + I F  DS+SI   F ++
Sbjct: 224 DSDGDGVPDDQDQCAGTDAARVAEVDSVGCLGEVKTLRTEVVSITFPLDSASIPAEFDSE 283

Query: 108 IRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPERVNIV 166
           I ++A  +     T IE+ G+A   G + +N  LS++R+E+V   L+ R     +R+  V
Sbjct: 284 IDRIAALILENTGTVIEIAGHADASGDSVYNQRLSQRRAESVASALISRNATIADRIKAV 343

Query: 167 GYGDSVLEVEGTDDVSHAR--NRRVTATV 193
           GYG++  +   T++ +  R  NRRV A V
Sbjct: 344 GYGET--QPIATNETAQGREMNRRVEARV 370