Pairwise Alignments

Query, 212 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (306), Expect = 5e-33
 Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 1/166 (0%)

Query: 44  QIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIEPA 103
           Q +DL D D DGVI AR+ C +T KG+  DN GCG     ++ +++++LF N+S+ I P 
Sbjct: 31  QASDLSDKDGDGVIEARERCNETAKGAGTDNYGCGQIKSINERKEINVLFPNNSAYIAPE 90

Query: 104 FLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RYGVAPER 162
           +  QI ++A FL+ YP+T + ++G+ S+ G+ E N  LS++R+ AV   L  R+G+   R
Sbjct: 91  YYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAVTAVLAERFGIDRSR 150

Query: 163 VNIVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKGEVVKEWTIFT 208
           +  +GYG S   V      +  RNRRV A V G       +WTI++
Sbjct: 151 LTAIGYGSSRPIVLEQTPEAEIRNRRVVAEVTGDDTATDMKWTIYS 196