Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

 Score =  279 bits (713), Expect = 1e-79
 Identities = 161/425 (37%), Positives = 241/425 (56%), Gaps = 4/425 (0%)

Query: 15  KAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLD 74
           KA+  A+A S  V AQTL QA+   L  +PE+++  N   + +Y  +A+ G YLP++DL 
Sbjct: 7   KALPFALAASF-VQAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDLA 65

Query: 75  AGIGYEAINPAES-SGNRN--TDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQ 131
           AG G E  +   + SG  N    L R +++L L+Q+++DG AT +++ R  A   A  Y 
Sbjct: 66  AGYGREGTDSVTTRSGGTNHWETLNRSESSLRLSQMVFDGFATSSEVGRQQATVNARAYS 125

Query: 132 LLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQV 191
           LL  +    L VA++YLD     E + L+E NL  H+ I+  IK R   G+GS AD+ Q 
Sbjct: 126 LLDASERTGLTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGSGADLDQA 185

Query: 192 EARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQEN 251
           EAR+A+A +NL+  Q NL D  T +   VGQ P  LE P      +P  L  A     EN
Sbjct: 186 EARMAQARNNLITEQTNLADAETNYLSAVGQLPDQLERPADFLALLPANLTEARAQMLEN 245

Query: 252 HPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYN 311
            PV++ A+AD+ AA  QY+ +K+  YP    E  ++  ND  G  G ++E  AMLR+R+N
Sbjct: 246 SPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGRTADNDLDGQNGHNNEWQAMLRMRFN 305

Query: 312 LYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSA 371
           LY GGS+    ES +Y  N++ D+R    R + E L L+W+AL+    Q      +VD +
Sbjct: 306 LYAGGSNKADLESKSYLSNQALDIRNNALRQLNEELGLAWNALNNANAQVPVAQQYVDRS 365

Query: 372 SKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDAL 431
           +    +Y+KQ+ +G+RTLLDLL++ENELF A +   + +  + + +YR+    G LL + 
Sbjct: 366 ANVRTAYQKQFSLGERTLLDLLDSENELFSASRRLAEIKNVQLFTQYRIKATMGQLLKSQ 425

Query: 432 RVDIP 436
            V  P
Sbjct: 426 GVVAP 430