Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 98.6 bits (244), Expect = 4e-25
 Identities = 100/428 (23%), Positives = 183/428 (42%), Gaps = 20/428 (4%)

Query: 19  LAIALSNPVSAQT-LEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGI 77
           +A A   P++ +T L       + +N +L +A  Q+ +++     +    LP +   A +
Sbjct: 18  MAWAAEAPLTTRTDLVSVYQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLSAGADL 77

Query: 78  GYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADAS 137
                   + +   N   T   ATL+  Q I+            + + +A   QL A   
Sbjct: 78  NNTRTELDQPAMTANRSSTVYQATLS--QPIFRADRWFQLQAAKSVDEQAS-LQLSATEQ 134

Query: 138 NMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAK 197
           NM L+ A+ Y +  ++ + L  ++   A  K       +R D G+    DV Q +A    
Sbjct: 135 NMILQSAESYFNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDT 194

Query: 198 AHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENA---LNMAQENHPV 254
           A +N + AQ  + D +     L  ++  SL+        +PP   +A   ++ A + +  
Sbjct: 195 ARANRILAQRQVDDAFEALITLTNRQYNSLQGIVHTLPILPPAPNDAKAWVDTAAKQNLN 254

Query: 255 IKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIE------------GSSDEL 302
           +  +   V AA    +Q KA + PTL    AQ  + D  G+             G +++ 
Sbjct: 255 LLASNYAVTAAEDTLRQRKAGHAPTLD-AIAQYKKGDNDGLGFTNPNPTGQRYGGDAEQR 313

Query: 303 SAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQ 362
           +  L+L   LY+GG  S +   +  QL +++  RE   R V E  R    A++  ++Q Q
Sbjct: 314 TIGLQLSIPLYSGGLTSSQVRESYSQLTQTEQQREALRRQVVENTRNLHRAVNTDVEQVQ 373

Query: 363 FLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMN 422
                + S    V +    YQ+G R ++D+L+ + +L+ + ++Y +ARY       R+  
Sbjct: 374 ARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNARYDYILDNLRLKQ 433

Query: 423 ASGNLLDA 430
           A+G L  A
Sbjct: 434 AAGTLSPA 441