Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Type I secretion system, outer membrane component LapE # AggA from Pseudomonas fluorescens FW300-N2E2

 Score =  274 bits (701), Expect = 3e-78
 Identities = 151/417 (36%), Positives = 234/417 (56%), Gaps = 3/417 (0%)

Query: 31  TLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIG--YEAINPAESS 88
           +L +A+  T+A++PEL    +   S   D + + G + P +DL+AG G  Y       + 
Sbjct: 2   SLTEAIQSTIATHPELAQRVDSRLSANEDVKVARGGFFPSVDLNAGYGRGYSDNTNTRAL 61

Query: 89  GNRNTD-LTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIY 147
           GN +T+ LT   + L L Q+I+DG  T N++DRT     +  Y     A ++AL   ++Y
Sbjct: 62  GNHHTNILTYTQSELRLRQMIFDGFNTANEVDRTQGVVNSRAYYAQGTAQDLALRTIEVY 121

Query: 148 LDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQN 207
           L+  K  E++TL++NNL  H  +   I  R + G+GSTAD  Q  AR A A +N   AQ 
Sbjct: 122 LEVLKRRELVTLAKNNLQAHLRVNDQIGLRTERGVGSTADSDQSNARRALAENNYDTAQV 181

Query: 208 NLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENHPVIKVAQADVDAARF 267
           +L D    F  +VG+ P  LE P + +  IP  L  A     +N+P +K AQAD+ +A  
Sbjct: 182 DLADAEANFYSVVGRMPDELETPPSTKGEIPADLREAQQSMVDNNPYLKSAQADIQSAES 241

Query: 268 QYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSDRTESAAY 327
           QY+ +K+P YP    EAA    N+ GG EG  +     + + YNL+ GGSD  R  S A+
Sbjct: 242 QYEVAKSPFYPRFDAEAAVGANNNIGGEEGHDNNWRVGVVMNYNLFRGGSDKARLASNAH 301

Query: 328 QLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQR 387
           Q+N++ D+R    R + E  RL+W+A+    +Q     ++ D+ ++   +Y+ Q+ +GQR
Sbjct: 302 QINQAMDIRNNALRQLNEDTRLAWNAMLNARKQTPTAREYADTTARVRAAYQDQFGLGQR 361

Query: 388 TLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDALRVDIPQEWTAKVE 444
           TLLDLL++ENEL+ A + Y + RY E+Y+ YRV+   G LL   R+ +P +  A+ E
Sbjct: 362 TLLDLLDSENELYNANRRYTEVRYTEEYSMYRVLANMGLLLHKQRIVLPADTVAQTE 418