Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., ABC-type protease exporter, outer membrane component PrtF/AprF from Pseudomonas fluorescens FW300-N2E2

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 13/364 (3%)

Query: 82  INPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMAL 141
           +N   +S + + + +   ++LTL Q + D  A        A    AD       +  + +
Sbjct: 78  LNDRGASQHDDRNYSSYGSSLTLQQPLLDYEAYAAYRKGVAQALFADE-NFRGKSQELLV 136

Query: 142 EVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSN 201
            V   Y  A  A + + +++      +  +R  +     G G+  D+ + +AR   A + 
Sbjct: 137 RVLSHYTQALFAQDQIDIAQAKKKAFEQQFRQNEHLFRQGEGTRTDILEAQARYELAIAE 196

Query: 202 LVAAQNNLFDIYTQFRRLVGQEPVSLE--FPRADQNAI----PPTLENALNMAQENHPVI 255
            + A++       +   L+G   + +    P  D        P + +    +A  N+P +
Sbjct: 197 EIEARDEQDAALRELGSLIGVPALDIGDLAPLHDTFQTFALQPASFDTWHELAVSNNPSL 256

Query: 256 KVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS--DELSAMLRLRYNLY 313
              +  VD ARF+ ++++A + P +S  A         G   +   D  +  L +   LY
Sbjct: 257 ASQRQAVDVARFEVERNRAGHLPKVSAYATMRQNESESGNTYNQRYDTNTIGLEVSVPLY 316

Query: 314 NGGSDSDRTESAAYQLNRSK-DLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSAS 372
            GG  S  T  A+  + +++ +L  KT  T+ E LR  +SA    + + +     + SA 
Sbjct: 317 AGGGVSASTRQASRTMEQAEYELDAKTRETLIE-LRRQFSACVSGVNKLRAYQKALSSAE 375

Query: 373 KTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNL--LDA 430
             VVS R+    G+R  LD LN E +L+  R+D   ARY    A  ++   +G L   D 
Sbjct: 376 ALVVSTRQSILGGERVNLDALNAEQQLYSTRRDLAQARYDYLMAWTKLHYYAGTLGPQDL 435

Query: 431 LRVD 434
            +VD
Sbjct: 436 AKVD 439



 Score = 30.8 bits (68), Expect = 9e-05
 Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 9/187 (4%)

Query: 38  ITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTR 97
           + +++NP L S         ++ E +   +LPK+   A +     N +ES    N     
Sbjct: 248 LAVSNNPSLASQRQAVDVARFEVERNRAGHLPKVSAYATMRQ---NESESGNTYNQRYDT 304

Query: 98  KDATLTLTQLIWDG---SATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKAS 154
               L ++  ++ G   SA+     RT  +AE   Y+L A      +E+ + +       
Sbjct: 305 NTIGLEVSVPLYAGGGVSASTRQASRTMEQAE---YELDAKTRETLIELRRQFSACVSGV 361

Query: 155 EILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYT 214
             L   +  L+  + +    ++    G     D    E +L     +L  A+ +    +T
Sbjct: 362 NKLRAYQKALSSAEALVVSTRQSILGGERVNLDALNAEQQLYSTRRDLAQARYDYLMAWT 421

Query: 215 QFRRLVG 221
           +     G
Sbjct: 422 KLHYYAG 428