Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., channel protein TolC from Pseudomonas fluorescens FW300-N2C3

 Score =  282 bits (721), Expect = 2e-80
 Identities = 156/432 (36%), Positives = 242/432 (56%), Gaps = 3/432 (0%)

Query: 16  AIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDA 75
           A+ LA+A S+   A +L +A+  T+A++PEL    +   S   D + + G + P +DL+A
Sbjct: 10  AVLLAMACSSQAQAMSLTEAIQSTIATHPELAQRVDSRLSANEDVKVARGGFFPSVDLNA 69

Query: 76  GIG--YEAINPAESSGNRNTD-LTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQL 132
           G G  Y       + GN +T+ LT   + L L Q+I+DG  T N++ RT     +  Y  
Sbjct: 70  GYGRGYSDNTNTRALGNHHTNILTYTQSELRLRQMIFDGFNTANEVQRTQGVVNSRAYYA 129

Query: 133 LADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVE 192
              A ++AL   ++YL+  K  E++TL++NNL  H  +   I  R + G+GSTAD  Q  
Sbjct: 130 QGTAQDLALRTIEVYLEVLKRRELVTLAKNNLQAHLRVNDQIGLRTERGVGSTADSDQSN 189

Query: 193 ARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENH 252
           AR A A +N   AQ +L D    F  +VG+ P  LE P + +  IP  L  A     +N+
Sbjct: 190 ARRALAENNFDTAQVDLADAEANFYSVVGRMPDELEAPPSTKGEIPADLREAQQSMVDNN 249

Query: 253 PVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNL 312
           P +K AQAD+ +A  QY+ +K+P YP    EAA    N+ GG EG  +     + + YNL
Sbjct: 250 PYLKSAQADIQSAESQYEVAKSPFYPRFDAEAAVGANNNLGGEEGHDNNWRVGVVMNYNL 309

Query: 313 YNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSAS 372
           + GGSD  R  S A+Q+N++ D+R    R + E  RL+W+A+    +Q     ++ D+ +
Sbjct: 310 FRGGSDKARLASNAHQINQAMDIRNNALRQLNEDTRLAWNAMLNARKQTPTAREYADTTA 369

Query: 373 KTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDALR 432
           +   +Y+ Q+ +GQRTLLDLL++ENEL+ A + Y + RY E+Y+ YRV+   G LL   R
Sbjct: 370 RVRAAYQDQFGLGQRTLLDLLDSENELYNANRRYTEVRYTEEYSMYRVLANMGLLLHKQR 429

Query: 433 VDIPQEWTAKVE 444
           + +P +  A+ E
Sbjct: 430 IVLPADAVAQTE 441