Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., type I secretion outer membrane protein, TolC family from Pseudomonas stutzeri RCH2

 Score =  103 bits (256), Expect = 2e-26
 Identities = 106/449 (23%), Positives = 189/449 (42%), Gaps = 33/449 (7%)

Query: 8   VLKGLPLKAIALAIALSNPVSAQTLEQAVSITLAS--------NPELKSAFNQFKSREYD 59
           +L+ LPL     ++      + +T+  A    L S        N +L +A  QF++R+  
Sbjct: 1   MLRRLPLALAVASLTAGAAWAQETVPLASKTDLVSVYQQAVNNNADLAAARAQFRARQEI 60

Query: 60  AEASSGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMD 119
              +    LP +   A +     +   S G+ +   +      TL+Q I+          
Sbjct: 61  VPQARAGLLPNLSAGAELSDTETDVDTSRGSTSLSRSGTAYQATLSQPIFRADRWFQLKA 120

Query: 120 RTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRAD 179
             A   +A     +A+  ++ L+ A+ Y    +A + L   +   A  K       +R +
Sbjct: 121 AQAVSEQAAIEYSIAE-QDLILQSAQSYFAVLRAQDNLAAVKAEEAAFKRQLDQANERFE 179

Query: 180 SGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPP 239
            G+    DV + +A    A +N   AQ  + D +     L  +E ++LE  R     + P
Sbjct: 180 VGLSDKTDVLEAQAGFDTARANRSIAQRQVDDAFQALFTLTNREYIALEGIRHTLPVLAP 239

Query: 240 TLENAL----NMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWR---NDA 292
               A        ++N  ++ V  A V AA    +Q ++ + PTL  +A  S+R   ND+
Sbjct: 240 APNEAKAWVDTATRQNLNLLAVNYA-VTAAEETLRQRRSGHAPTL--DAVASYRKGDNDS 296

Query: 293 GGIEGSS--------------DELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREK 338
            G   S               ++ S  L+L   LY+GG  + ++  A YQL++S+  RE 
Sbjct: 297 LGFSNSQNIPGFDMPRYTGDVEQRSIGLQLNIPLYSGGLTTSQSREAYYQLSQSEQQRES 356

Query: 339 TFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENE 398
             R V E  R    A++  ++Q +     + S    + +    YQ+G R ++D+L+T+  
Sbjct: 357 LRRQVVESTRNLHRAVNTDIEQVEARRQSIISNQSALEATEIGYQVGTRNIVDVLDTQRR 416

Query: 399 LFEARKDYLDARYAEQYAKYRVMNASGNL 427
           L+ A +DY +ARY       R+  A+G L
Sbjct: 417 LYGAVRDYNNARYDYILDNLRLKQAAGTL 445