Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 92/433 (21%), Positives = 181/433 (41%), Gaps = 18/433 (4%)

Query: 13  PLKAIAL-AIALSNPVSAQTLE--QAVSITLASNPELKSAFNQFKSREYDAEASSGAYLP 69
           P KA  L AI L     +Q +   Q   + L ++P    A  +  +   +        LP
Sbjct: 5   PFKAALLTAILLGTAPLSQAMGPFQVYELALRNDPVYLGALKERDAGLENRVIGRAGLLP 64

Query: 70  KIDLDAGIGY-EAINPAESSGNRNTDLTRKDA---TLTLTQLIWDGSATLNDMDRTAAEA 125
           ++      G  ++    + S    TD    ++   +LT+ Q + D  A  N     A   
Sbjct: 65  RVSYSYNKGRNDSKATLKGSAQDTTDHRHYNSFGSSLTVQQPLIDYEAYANYRKGLAQAL 124

Query: 126 EADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGST 185
            AD     + +  + + V  +Y  A  A + + ++       +  +   ++  + G G+ 
Sbjct: 125 FADE-TFRSKSQELLVRVLTLYTQALFAQDQINIARAKQQAFERQFAQNRQMFERGEGTR 183

Query: 186 ADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVS---LEFPRADQNAI---PP 239
            D+ + E+R   A +  + A +       +   L+G+  +    LE  R    A+   P 
Sbjct: 184 TDILEAESRNELAIAEQIEASDEQDAALRELAALLGEPSIDVAQLEPLRDSFQALVLAPS 243

Query: 240 TLENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLS-FEAAQSWRNDAGGIEGS 298
           +      +A  N P++   +  ++ AR++ ++++A + PT++ + + +   +D+G     
Sbjct: 244 SFTEWHALAMANSPILASQRQSLEVARYEVERNRAGHLPTVNAYASIRQNESDSGNTYNQ 303

Query: 299 SDELSAM-LRLRYNLYNGGSDSDRTESAAYQLNRSK-DLREKTFRTVEEGLRLSWSALDL 356
             + + + + L   LY GG  S     A  +  +++ +L  KT  T+ E LR  ++A   
Sbjct: 304 RYDTNTIGIELSLPLYAGGGTSASVRQANSKREQAEYELEGKTRETLIE-LRRQFNACAS 362

Query: 357 TLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYA 416
            + + +     + SA   V S R+    G+R  LD LN E +L+  R+D   ARY    A
Sbjct: 363 GVNKLRAYQKALISAQALVESTRQSILGGERISLDALNAEQQLYSTRRDLAKARYDYLMA 422

Query: 417 KYRVMNASGNLLD 429
             ++   +G L D
Sbjct: 423 WIKLHYYAGTLRD 435