Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score = 98.6 bits (244), Expect = 4e-25
 Identities = 105/440 (23%), Positives = 187/440 (42%), Gaps = 29/440 (6%)

Query: 14  LKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDL 73
           L+ ++L +A+S   ++  L  A  + + +   L S + Q      D  AS   Y  + + 
Sbjct: 2   LRKLSLVVAVS--FASSGLTWAAELPMPTQTGLLSVYQQAVDNNADLAASRADYDARKEA 59

Query: 74  ----DAGIGYEAINPAESSGNRNT-DLTRKDAT-------LTLTQLIWDGSATLNDMDRT 121
                AG+       A++S  R + D  R  A+        TL+Q I+        +   
Sbjct: 60  VPQARAGLLPNISGSAQNSSTRTSIDQPRAVASRSGNLYQATLSQPIFRADRWFQ-LQAA 118

Query: 122 AAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSG 181
            A  E    +L A   N+ L+ A+ Y    +A + L  ++   A  K       +R D G
Sbjct: 119 EASNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVG 178

Query: 182 IGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTL 241
           +    DV Q +A    + ++ + AQ  + D +     L  +E  S+E        + PT 
Sbjct: 179 LSDKTDVLQAQASYDTSRASRLIAQRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTP 238

Query: 242 ENA---LNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAA-QSWRNDAGGIE- 296
            +A   ++ A + +  +  +   V+AA    +Q KA + PTL   A  Q   NDA G   
Sbjct: 239 NDAKAWVDTAAQQNLNLLASNYAVNAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSN 298

Query: 297 ---------GSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGL 347
                    G  ++ S  ++L   +Y+GG  S +   A  +L++S+  RE   R V E  
Sbjct: 299 PNYTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYARLSQSEQRRESLRRQVVENT 358

Query: 348 RLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYL 407
           R    A++  ++Q Q     + S    + +    YQ+G R ++D+L+ + +L+ + +DY 
Sbjct: 359 RNLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYN 418

Query: 408 DARYAEQYAKYRVMNASGNL 427
           + RY       R+  A+G L
Sbjct: 419 NTRYDYILDNLRLKQAAGTL 438