Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., type I secretion outer membrane protein, TolC (RefSeq) from Shewanella amazonensis SB2B

 Score =  375 bits (963), Expect = e-108
 Identities = 193/458 (42%), Positives = 302/458 (65%), Gaps = 21/458 (4%)

Query: 9   LKGLPLKAIALAIA---LSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSG 65
           L+ L L  +A AI    +    SA TLEQAV+ TL SNP+L++AFN+FK+RE     +  
Sbjct: 6   LQQLRLGVLAAAIGGIMMPMAASAMTLEQAVAHTLDSNPDLRAAFNRFKAREEQVSQAIS 65

Query: 66  AYLPKIDLDAGIGYEAINPAESS---GNRNTD--LTRKDATLTLTQLIWDGSATLNDMDR 120
            Y+P +D+  G G+E  +   +    G  + D  L R +A +++ Q+++DG  T +++DR
Sbjct: 66  GYMPTVDITGGWGWEQTDSPATRRRFGREDGDFELKRGEAGISIRQMLFDGFYTASEVDR 125

Query: 121 TAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADS 180
            + EA AD++ L A A +MAL+VAK+Y++  +A +++TL+E NLA HK+IY  IK+R DS
Sbjct: 126 LSFEASADQWALFAAAEDMALDVAKVYVNYIRAEQVMTLAEKNLATHKEIYDQIKQRTDS 185

Query: 181 GIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPT 240
           G+GS AD++Q+  RLA+A++N+++A+NN FD   QF R+V + P  +  P  D + +P  
Sbjct: 186 GLGSIADLSQITGRLARANANVISARNNFFDAKAQFARVVDKAPDDMIVPVPDADMLPTD 245

Query: 241 LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGG------ 294
           L  ++++AQENHPV+K A AD++AA  +   +++  YP ++ E   +W N+  G      
Sbjct: 246 LSTSVSLAQENHPVLKSAAADINAAENERSSAQSSYYPRVTLELDGNWNNNLDGEDGIAG 305

Query: 295 -------IEGSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGL 347
                  + G +++L AM+R+RYNL+ GG D  R + AAY++  +K++R++ +R V EG+
Sbjct: 306 TGAFRTDVGGYNNDLVAMVRVRYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYREVVEGV 365

Query: 348 RLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYL 407
            L+W+A ++   QK ++ +HV +A  T V+Y +Q+ +GQRTLLDLL+TENELFEARKDYL
Sbjct: 366 NLAWNAYEMLTPQKDYIREHVKAAKDTQVAYTQQFNLGQRTLLDLLDTENELFEARKDYL 425

Query: 408 DARYAEQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY 445
            A + E  AKYRV+NA+G LLD+L+V  P  W  + EY
Sbjct: 426 QAEFDEIVAKYRVLNATGRLLDSLKVTRPTVWQGEREY 463