Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., outer membrane channel protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  103 bits (257), Expect = 1e-26
 Identities = 105/423 (24%), Positives = 187/423 (44%), Gaps = 28/423 (6%)

Query: 16  AIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDA 75
           AIALA + S+ V A  L Q     L ++P +  A  Q  +     E +    LP I  + 
Sbjct: 11  AIALAASASS-VQADDLLQIYQQALTNDPLVLQAQAQRNALYAQIEENRAPLLPTISANV 69

Query: 76  GIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSAT--LNDMDRTAAEAEADRYQLL 133
           G      +P+E S             + LTQ+I+D SA   L+  ++ AA+A+A     L
Sbjct: 70  GYDKAWKDPSEDSDGFT-------GGVKLTQVIYDHSAWVGLSLAEKAAAQADAAYASAL 122

Query: 134 ADASNMALEVAKIYLDATKASEILTLS-ENNLAIHKDIYRDIKKRADSGIGSTADVTQVE 192
               N+   V K Y D  KA +          AI + +    K+R   G+ +  DV + +
Sbjct: 123 ---QNLITRVTKAYFDVLKAKDNYEFQGAEKRAIERQL-EQTKQRFAVGLTAMTDVHEAQ 178

Query: 193 ARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVS---LEFPRADQNAIPPTLENA-LNMA 248
           A+   A +  + A+N L + Y   R + G +  S   L+  R    A  P   N  + MA
Sbjct: 179 AQYDLASATEILAENTLSNSYEALREITGIDHKSINVLDTNRFSAAAPAPAAPNEWIKMA 238

Query: 249 QENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS----DELSA 304
           + N   +   +   D A       KA +YP+LS  A  +      G E +     D  S 
Sbjct: 239 ENNSTDLLTQRIGKDIAEETISLYKAGHYPSLSLSAGYT-----KGFEQTPGPDYDNSSI 293

Query: 305 MLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFL 364
            + L   ++ G   + + E A Y+   + +  E+T+R V + +R +++ +  ++   +  
Sbjct: 294 GVTLSIPIFEGFKVTSKVEQAQYKYVEASEKLEQTYRRVVKDVRNNFNNVGASISSIRAY 353

Query: 365 ADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNAS 424
              V S+   + + +  +++G RT++D+LN   +L+++++   DARY+   +   +  A+
Sbjct: 354 EQSVLSSESALGATQSGFEVGTRTIVDVLNRTRDLYDSKRKLSDARYSYISSVLALKQAA 413

Query: 425 GNL 427
           G L
Sbjct: 414 GTL 416