Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 87/394 (22%), Positives = 158/394 (40%), Gaps = 32/394 (8%)

Query: 32  LEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAESSGNR 91
           L   +S  +  N +L++AF +          +   + P +             A S+ NR
Sbjct: 60  LSALMSDAMTGNQDLEAAFRRVAQARASLAGTRAGWFPTLS------------ASSNANR 107

Query: 92  NTDLTRKDATLTLTQLIWDGSATLNDMDR--------TAAEAEADRYQLLADASNMAL-- 141
           +   T + A  T       G     ++D          +AEA A    L  DA  +++  
Sbjct: 108 SLHNTARTAAATEKTTYDVGGDLSWEVDLFGKTRASVLSAEATAQSQALARDALALSIQG 167

Query: 142 EVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSN 201
           EVA  Y+ A  A + L ++  NLA  ++I   I+ +   G  +  +  Q  + +A   ++
Sbjct: 168 EVATAYVTALAAKDRLAIARENLATAREILALIETQVSIGSQAPLEQAQQRSTVAGIEAS 227

Query: 202 LVAAQNNLFDIYTQFRRLVGQEP--VSLEFPRADQNAIPPTLENALNMAQENHPVIKVAQ 259
           L   + +L    T    L+G+ P    ++ P  +  A+P       +   E  P I+ A+
Sbjct: 228 LPQLEADLAAAQTSLAVLLGRAPQGFRIQAPGLNALALPAIAPGQPSDLLERRPDIREAE 287

Query: 260 ADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDS 319
           A + AA      +++  +PTL+  A+ S      G  G++   S    L   +++ G   
Sbjct: 288 ATLIAANADIGAARSAFFPTLTLSASASLSGALSG--GTTTAGSLAGNLLGTIFDAGKRE 345

Query: 320 DRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSAL---DLTLQQKQFLADHVDSASKTVV 376
              E A     R  +L      TV   L+ +  AL   D   +++  LA+ V  +++ + 
Sbjct: 346 ADLEVAR---QRWAELAATYRTTVLTALKEAEDALVTEDTGARREVALAEAVVQSTEALR 402

Query: 377 SYRKQYQIGQRTLLDLLNTENELFEARKDYLDAR 410
             R QYQ+G    L +L  +  +  +R     AR
Sbjct: 403 IARTQYQVGDGDFLAVLTAQQTVLSSRDSLAQAR 436