Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., Type I secretion outer membrane protein, TolC (NCBI) from Rhodospirillum rubrum S1H

 Score =  123 bits (309), Expect = 1e-32
 Identities = 97/423 (22%), Positives = 190/423 (44%), Gaps = 12/423 (2%)

Query: 12  LPLKAIALAIA--------LSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEAS 63
           L +K +++A+A        LS+PV A+T ++A+     +NP L++     ++ +     +
Sbjct: 52  LMIKPVSIAVASLLVAGLGLSSPVMAETFDEALVSAYQANPTLQARRALLRAVDEQVPQA 111

Query: 64  SGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAA 123
              + P++ +     Y+ ++     G +N D       + L Q I+ G  T+   D+  A
Sbjct: 112 LSDWRPQVSVQGSTFYQQMD--YEPGRKNLDNRPATLGVVLQQNIFRGLRTVAQTDQAKA 169

Query: 124 EAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIG 183
           + +++R  L +    + L  A+ Y +  +   +L L+ NN  + +        R   G  
Sbjct: 170 QVQSERALLRSVEQTVLLNAAQAYFNVIRDQAVLELNINNEQVLRRQLDAANDRFRVGEI 229

Query: 184 STADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLEN 243
           +  DV Q ++RLA A ++ + A+  L      + ++VG  P +++ P      +P TLE+
Sbjct: 230 TRTDVAQADSRLAGAIADRIQAEGTLESSRANYTQVVGHPPENIQ-PPPPYARLPQTLED 288

Query: 244 ALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSW-RNDAGGIEGSSDEL 302
            LN A   +P +  A      A+   +  +    PTL+ E + S+  N +   E  +   
Sbjct: 289 GLNTALSANPDVIAALYVWRQAQAAIRDQRGKLLPTLNAEVSYSFSHNPSATTEYDTKTF 348

Query: 303 SAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQ 362
            A L L   LY GG+   +   A ++  + +   ++    V E L  +W  L     +  
Sbjct: 349 QAGLNLTVPLYQGGAVYSQIRDAKHRAGQRRLQVDEQREAVIESLTSAWETLTSARARVS 408

Query: 363 FLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMN 422
                +++A   +   +++ Q+G RT+LD+L+ E EL  +R + + A      + Y V+ 
Sbjct: 409 SYKSQIEAAGIALDGVQREAQVGSRTVLDVLDAEQELLTSRVNLVRAERDSAISTYEVLA 468

Query: 423 ASG 425
           A G
Sbjct: 469 ALG 471