Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., TolC family outer membrane protein from Rhodopseudomonas palustris CGA009

 Score =  140 bits (353), Expect = 8e-38
 Identities = 105/429 (24%), Positives = 192/429 (44%), Gaps = 16/429 (3%)

Query: 9   LKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYL 68
           + GL    I LA A      A T+E A+     +NP+L +     ++ +     +   Y 
Sbjct: 7   ISGLAAAGIVLACASQTVALADTMEGALVRAYQTNPQLNAQRASVRATDESVPQALSGYR 66

Query: 69  PKIDLDAGIGYEAINPAESSGNRNTDLTR----KDATLTLTQLIWDGSATLNDMDRTAAE 124
           PK+ + A  GY+  +   S       L+     +   +T +Q +++G+ T N      ++
Sbjct: 67  PKVAVTASGGYQYTDVISSVAGSQFHLSGTQIPRSVGVTASQTLFNGNQTANRTRAAESQ 126

Query: 125 AEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGS 184
             + R  L     ++ L  A IY+D  + S  L +  +N+ + +   R    R + G  +
Sbjct: 127 VSSAREGLRVLEQSVLLSAATIYMDYLRDSATLEVQRSNVRVLEQTLRQTNDRFNVGEVT 186

Query: 185 TADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENA 244
             DV Q +A+LA  ++  +AA++ L    + +RR++G EP +L         +P +L  A
Sbjct: 187 RTDVAQSQAQLAAGNTQQLAAESTLTTTRSNYRRIIGTEPGNLAPGSPVDRYLPTSLAQA 246

Query: 245 LNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAA--QSWRNDAGGIEGSSDEL 302
           +N+A   +P +  A   +D +    K ++   +PTL+ +A+  QSW            + 
Sbjct: 247 INLALVENPNVTAAMYGIDVSYLNVKINEGALFPTLTLQASAQQSWEPSIS--SPRQFQA 304

Query: 303 SAMLRLRYNLYNGGSD----SDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTL 358
           S + +L   +Y GG +        E+ A Q    + +R++T  +V +    +W  L    
Sbjct: 305 SGVAQLSVPIYQGGGEYALIRQSKETLAQQRLNLEQVRDQTRASVVQ----AWGQLQAAK 360

Query: 359 QQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKY 418
            Q       V ++   +   R++ + GQRT LD+LN +  L  AR   + A++    A Y
Sbjct: 361 AQVSSAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVNARVALVTAQHDRVVASY 420

Query: 419 RVMNASGNL 427
            V+NA G L
Sbjct: 421 AVLNAVGRL 429