Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., agglutination protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  374 bits (959), Expect = e-108
 Identities = 194/453 (42%), Positives = 295/453 (65%), Gaps = 22/453 (4%)

Query: 15  KAIALAIALSNPVSAQ--TLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKID 72
           K   L  A+  P+SAQ  TLEQAV+ TL +NP+L+ AFN+FK+RE     +   Y+P +D
Sbjct: 13  KIAVLLSAILLPLSAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVD 72

Query: 73  LDAGIGYEAINPAESSGNRNT---------DLTRKDATLTLTQLIWDGSATLNDMDRTAA 123
           L  G GYE  +   +   +N          +L R +  ++L Q+++DG  T +++DR + 
Sbjct: 73  LTGGYGYEQTDSVSTRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSF 132

Query: 124 EAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIG 183
           EA AD++ LLA A +MAL+V+K YL+  +  E+L L+E NL  HK+IY  IK+R DSG+G
Sbjct: 133 EASADQWALLAAAEDMALDVSKAYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLG 192

Query: 184 STADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLEN 243
           STAD++Q+  RLA+A++N+++A+NNL D   QF R+V  +PV L  P  D + +P  L +
Sbjct: 193 STADLSQISGRLARANANVISARNNLLDAKAQFVRVVAADPVDLIQPVPDADMLPKDLNS 252

Query: 244 ALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGG--------- 294
           ++  A++NHP++K A  D+ AA  +   ++A  YP +S E   SW ND GG         
Sbjct: 253 SIADAEKNHPILKSAANDIRAAENERSSTQANYYPQVSLELNGSWNNDVGGEDGVSAIAS 312

Query: 295 --IEGSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWS 352
             + G S+++ AM+R++YNL+ GG D  R + +AY+L+ +K++R++  R V EG+ L+W+
Sbjct: 313 QNVGGYSNDIVAMVRVKYNLFAGGKDLAREKESAYKLSEAKEIRQRAQREVVEGVNLAWN 372

Query: 353 ALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYA 412
           A ++   QKQ++ DHV +A  T  +Y +Q+ +GQR+LLDLL+TENELFEARKDYL A Y 
Sbjct: 373 AYEMLAPQKQYIRDHVIAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYD 432

Query: 413 EQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY 445
           E  AKYRV+N++G LLD+L+V  P+ W  +  Y
Sbjct: 433 ETIAKYRVLNSTGRLLDSLKVTRPEAWRGERNY 465