Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  203 bits (517), Expect = 8e-57
 Identities = 133/439 (30%), Positives = 230/439 (52%), Gaps = 11/439 (2%)

Query: 14  LKAIALAIALSNPVSAQT-LEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKID 72
           + A    ++L +   A+T L+ +V  T+ SNP+LK      ++  +D   +   +LP++D
Sbjct: 19  ISASGAFLSLPDVSFAETKLKDSVLSTINSNPKLKVFQENREAATHDLRRARAGWLPRVD 78

Query: 73  LDAGIGYEAINPAES-SGNRNTDLT-RKDATLTLTQLIWDGSATLNDMDRTAAEAEADRY 130
           + AG G E  +   S   N++ + T R DA+  LTQ +WDG AT + +D   A+ ++   
Sbjct: 79  VRAGYGAEQYSDTTSRQSNKDDEFTERGDASAVLTQTVWDGFATSSRVDVGKAKLDSADN 138

Query: 131 QLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQ 190
           +L+ +A  + L+    +++  +  EI+ LSE N+  H+ I     +R   G+ S ADVTQ
Sbjct: 139 RLMDNAEALGLDAVLAHIEVLRQREIVRLSEINVQQHQTILGSQSERQKMGVASIADVTQ 198

Query: 191 VEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRAD-QNAIPPTLENALNMAQ 249
            + RLA+A S LV +++ L      ++RL G E V  E  RA   +  P + E AL  + 
Sbjct: 199 TQGRLARAQSTLVESRSALEVAEAAYKRLTGME-VPTELERAGIPDTAPASFETALGASL 257

Query: 250 ENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLR 309
             +P I   Q+D+ AAR Q    K+  +P +  E   S++      E  +   +AM+R+ 
Sbjct: 258 TANPKIAAYQSDIQAARGQEDLDKSRFHPNVYLEVGPSYKERVESSESYAWGTTAMMRVN 317

Query: 310 YNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVD 369
           +N+Y+GG+D      +A ++ +S+   +    T+ E  R +WS      +Q  F    V 
Sbjct: 318 WNIYDGGADVAAVRGSAARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVT 377

Query: 370 SASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLD 429
             ++T  +Y +Q+ +GQR+LLD+L+ ENEL+ +    + A+  E    YR++   GNLL 
Sbjct: 378 YNTQTRDTYMQQFLVGQRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNLLA 437

Query: 430 ALRVD------IPQEWTAK 442
           +L +D      +P+E T +
Sbjct: 438 SLSIDRSELRNVPEEGTIR 456