Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., type I secretion outer membrane protein, TolC family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  117 bits (292), Expect = 1e-30
 Identities = 103/420 (24%), Positives = 190/420 (45%), Gaps = 12/420 (2%)

Query: 18  ALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGI 77
           A+  A S    AQ+L  A+  T  ++  ++ +    +S + D   +     P ++  A  
Sbjct: 14  AVLCAASGAAMAQSLTDALVDTYKNSELIEQSRALLRSADEDVAIAVSRLRPILNYSADY 73

Query: 78  GYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADAS 137
           GY        S N   +       +T + L++D   T   ++       A R  L A   
Sbjct: 74  GY--------SDNFGRETDNGSLGITASLLLFDFGRTRLGIEANKELVLATREALRATEQ 125

Query: 138 NMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAK 197
           ++ LE    +L+   A++ + L  NN+ +  +  R  + R + G  +  DV Q EARLA+
Sbjct: 126 DVLLEGVSAFLNVRGANDNVDLRRNNVRVITEQLRAARDRFEVGEVTRTDVAQAEARLAE 185

Query: 198 AHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENHPVIKV 257
           A++NL  A          +R +VGQ P SL  P     AIP T+E A ++A+  HP I  
Sbjct: 186 ANANLTRALGQQAAAREVYRAVVGQFPQSLA-PPPPSPAIPATVEEATSIAERTHPSILQ 244

Query: 258 AQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGS 317
            + +V A+    + ++    PT S  A  S R+    ++ ++D  S  L L   +Y GG 
Sbjct: 245 GRHNVRASEIVAEVAQKAILPTASATANIS-RSIRDSLDDTTDS-SIGLTLSGPIYQGGG 302

Query: 318 DSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVS 377
            S +   A   +  ++    ++   + + + ++W+ + +T          V++A      
Sbjct: 303 LSAQYRQALAGVENARATLNQSVLVIRQRVGIAWAEILVTRANIDSTRRQVEAAEIAFEG 362

Query: 378 YRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNL-LDALRVDIP 436
             ++ ++G RT LD+L+ E ++ +AR   L A  +   A Y +++A G + +D L + +P
Sbjct: 363 VTEEARLGARTTLDVLDAEQDVLDARTALLSAEISAVQAVYDLLSAMGLMTVDYLGLPVP 422