Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., type I secretion outer membrane protein rsaFb from Caulobacter crescentus NA1000

 Score =  119 bits (298), Expect = 2e-31
 Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 28  SAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAES 87
           +A+TL  A+++   +NP L+      +  +     +   + P +   A I     NPA  
Sbjct: 29  NAETLADAIALAYQTNPTLQQQRASARITDEGVVQAKTGFRPTVGATADITGANTNPA-- 86

Query: 88  SGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIY 147
           S   +  L+   A L++ Q ++ G      +    A+  + R  L A    + + V + Y
Sbjct: 87  SAGADVKLSGSSAALSIIQPLYTGGRASAGVSAAEADVLSAREGLRAVEQGVLVSVVQAY 146

Query: 148 LDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQN 207
           +D  +  E L +++ N+A+ +    +   R D G  +  DV Q +ARLA A ++L  AQ 
Sbjct: 147 VDVRRDQERLRIAKENVAVLQRQLEESNARFDVGEITRTDVAQSQARLASAKASLSGAQA 206

Query: 208 NLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENHPVIKVAQADVDAARF 267
            L      +  +VGQ P  L    +    +P +++ A   AQ N+P +  A+ + +AA  
Sbjct: 207 QLEVSRASYAAVVGQTPGELAPEPSLAGLLPASVDQAFEAAQTNNPGVTSAKFNEEAAAA 266

Query: 268 QYKQSKAPNYPTLSFEAAQSW----RNDAGG-IEGSSDELSAMLRLRYNLYNGGSDSDRT 322
           +   +KA   PT+S  A+  +    R+  G   +  S  +S  +     L+ GG  + + 
Sbjct: 267 RVAVAKAGYRPTVSARASLGYDATRRSGVGSQFDDYSRTVSGAITASIPLFAGGLTTSQV 326

Query: 323 ESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSY---R 379
            +A  + + ++   E   RT  + +  +WS L   L  +  L  + +    T +++   R
Sbjct: 327 RAANERESAARSAVEGAKRTAIQQVSNAWSNL---LASRAGLVANEEQVRATRIAFEGVR 383

Query: 380 KQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNL 427
           ++ Q+G RT LD+LN + EL  A    + AR  E  A   V+ A G L
Sbjct: 384 QEQQVGLRTTLDVLNAQLELSNAELALVSARRDEYLASAVVLQAMGQL 431