Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., efflux transporter outer membrane subunit from Ralstonia sp. UNC404CL21Col

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 87/406 (21%), Positives = 155/406 (38%), Gaps = 45/406 (11%)

Query: 32  LEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAESSGNR 91
           L++ + + L +N +L+ A    ++            LP ++  A   Y   +   S    
Sbjct: 80  LQKLIGLALENNRDLRVAMLNVEAARAQYRLQIADLLPPVNASAT--YTRSHTPPSISTT 137

Query: 92  NTDLTRKDATLTL------TQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAK 145
             D+  K   L +        L   G  T +      A  E  R    A   ++  +VAK
Sbjct: 138 GGDVYTKQYQLGVGISNYQVNLFSVGDVTSSARASYLATDEGRR----AAQISLISQVAK 193

Query: 146 IYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAA 205
            YL+    +E L L++  L   +D Y+  K+R D G  S  D+ Q E  +  A  ++   
Sbjct: 194 AYLNERAYAEQLDLAQQTLKGREDYYKLAKQRFDVGASSALDLRQTETLVESARVSVAQL 253

Query: 206 QNNLFDIYTQFRRLVGQE-PVSLEFPRADQNA-----IPPTLENALNMAQENHPVIKVAQ 259
                        LVG   P  L  P    +      IPP + + L    E  P I+ A+
Sbjct: 254 TRQYAQATNALVLLVGAPLPADLPAPTTVSSEKIVADIPPGVPSEL---LEQRPDIRQAE 310

Query: 260 ADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDEL--------SAMLRLRYN 311
             + AA      ++A  +P++         ++ G   G+  +L        S +  L   
Sbjct: 311 QKLIAANANIGVARAAFFPSIGL------TSNVGTASGALHDLFKSGTGFWSFVPNLTLP 364

Query: 312 LYNGGS-----DSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLAD 366
           ++N G+     D  +T       N  K + +  FR V + L    +  +    QK+F   
Sbjct: 365 IFNWGTNVFNLDLTKTNQKIAVANYEKTI-QTAFREVSDALVARGTLEEQVAAQKRFR-- 421

Query: 367 HVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYA 412
             D+ +  +    ++Y+ G  + LD+L+ + +LF A +  +  R A
Sbjct: 422 --DATADRLTLSDQRYRNGVSSFLDVLDAQRDLFSADQTLVQTRLA 465



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 56/253 (22%), Positives = 92/253 (36%), Gaps = 41/253 (16%)

Query: 8   VLKGLPLKAI--ALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSG 65
           +L G PL A   A     S  + A       S  L   P+++ A  +  +   +   +  
Sbjct: 266 LLVGAPLPADLPAPTTVSSEKIVADIPPGVPSELLEQRPDIRQAEQKLIAANANIGVARA 325

Query: 66  AYLPKIDLDAGIGYE--AINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAA 123
           A+ P I L + +G    A++    SG   T        LTL    W  +    D+ +T  
Sbjct: 326 AFFPSIGLTSNVGTASGALHDLFKSG---TGFWSFVPNLTLPIFNWGTNVFNLDLTKTNQ 382

Query: 124 EAEADRYQ------------LLADASNMALEVA--KIYLDATKASEILTLSENNLAIHKD 169
           +     Y+             L     +  +VA  K + DAT  ++ LTLS+        
Sbjct: 383 KIAVANYEKTIQTAFREVSDALVARGTLEEQVAAQKRFRDAT--ADRLTLSD-------- 432

Query: 170 IYRDIKKRADSGIGSTADVTQVEARLAKAHSNLV----AAQNNLFDIYTQFRRLVGQEPV 225
                 +R  +G+ S  DV   +  L  A   LV    A   N  D+YT     + ++  
Sbjct: 433 ------QRYRNGVSSFLDVLDAQRDLFSADQTLVQTRLARLTNAIDLYTALGGGLQEQST 486

Query: 226 SLEFPRADQNAIP 238
           ++   +A   A P
Sbjct: 487 TVAARQAQPTAAP 499