Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., TolC family type I secretion outer membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  377 bits (969), Expect = e-109
 Identities = 197/453 (43%), Positives = 292/453 (64%), Gaps = 22/453 (4%)

Query: 15  KAIALAIALSNPVSAQ--TLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKID 72
           K   L  A+  P+SAQ  TLEQAV+ TL +NP+L+ AFN+FK+RE     +   Y+P +D
Sbjct: 13  KIAVLLSAILLPLSAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVD 72

Query: 73  LDAGIGYEAINPAESSGNRNT---------DLTRKDATLTLTQLIWDGSATLNDMDRTAA 123
           +  G GYE  +   +   +N          +L R +  ++L Q+++DG  T +++DR + 
Sbjct: 73  ITGGYGYEQTDSVSTRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSF 132

Query: 124 EAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIG 183
           EA AD++ LLA A +MAL+V+K+YL+  +  E+L L+E NL  HKDIY  IK+R DSG+G
Sbjct: 133 EASADQWALLAAAEDMALDVSKVYLNYLRTDEVLKLAEKNLNSHKDIYEQIKQRTDSGLG 192

Query: 184 STADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLEN 243
           STAD++Q+  RLA+A++N+++A+NNL D   QF R++  +PV L  P  D + +P  L +
Sbjct: 193 STADLSQITGRLARANANVISARNNLLDAKAQFIRVIAADPVDLIQPVPDADLLPKDLNS 252

Query: 244 ALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS---- 299
            L  AQENHP++K A  D+ AA  +    +A  YP +S E   +W ND GG +G S    
Sbjct: 253 GLTDAQENHPILKSAANDIRAAENERSSVQASYYPQVSLELNGNWNNDVGGEDGVSALAS 312

Query: 300 -------DELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWS 352
                  ++L AM+R+RYNL+ GG D  R +  AY+L  +K++R++  R V EG+ L+W+
Sbjct: 313 QNVGGYNNDLVAMVRVRYNLFAGGKDLAREKETAYKLGEAKEIRQRAQREVVEGVNLAWN 372

Query: 353 ALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYA 412
           A ++   QKQ++ DHV +A  T  +Y +Q+ +GQR+LLDLL+TENELFEARKDYL A Y 
Sbjct: 373 AYEMLAPQKQYIRDHVMAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYD 432

Query: 413 EQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY 445
           E  AKYRV+N++G LLD+L+V  P+ W  +  Y
Sbjct: 433 EIIAKYRVLNSTGRLLDSLKVTRPEAWRGERNY 465