Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score = 67.8 bits (164), Expect = 5e-16
 Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 36/341 (10%)

Query: 17  AFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRR 76
           AFG   +  + YL  P  P +A  F   E  I    AA  L LS+  + +   ++  GRR
Sbjct: 14  AFGPLAI--DFYL--PAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADRFGRR 69

Query: 77  LVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKA 136
           + +LTG+    +  LA  YA    +L+  R +  +   A   ++ A + ++       K 
Sbjct: 70  IPLLTGVGLFTLASLACAYAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVGSAKV 129

Query: 137 IGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLP--IQQHF-- 192
               +    L  I   + GGLL +  GWQ   +A+ +F+ L +  VA  LP  +  +   
Sbjct: 130 FSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTLFSALASTAVALWLPESLPDYVPR 189

Query: 193 KPQRGLFFHHNRAL-----VKHLQNRTLWLAML---IGGVNFALFVNLYSVMGFRLVAEP 244
           +P  G    + R L     + H     + +A +   I G  F +F+ LY V      AE 
Sbjct: 190 QPLSGALRQYGRLLTDAVFLGHALTGGIAIAGMFAYIAGSPF-VFIKLYGV-----PAEH 243

Query: 245 YSLPIGIASLIFVCYLAGTLSSKLTANWNRRF--SAIPGMMLGALISMAGMLIALIEAIP 302
           +    G  +  F+  L   ++++L +     F  S    + LGA +S    L+A+    P
Sbjct: 244 FGWLFGTNAAGFI--LVAQVNARLLSKRGPAFLLSRAVWVYLGAGLS----LLAVSSLQP 297

Query: 303 AMLVGLI------LISFGAFFTHTLAYAWVSQKATQAKATA 337
           A L  L+      + S G    +  A A   Q A    A+A
Sbjct: 298 AQLWPLLVPLFICIASLGCILPNASACAMNGQGARAGSASA 338