Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

 Score = 81.3 bits (199), Expect = 6e-20
 Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 16/312 (5%)

Query: 4   LHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCL 63
           L SP++   + AL+  + L      +    LP LA     S  Q+ W+  A  LA++  +
Sbjct: 19  LFSPRWALASLALS--TLLASLGASVAAVALPTLAEALGASFQQVQWVVLAYLLAITTLI 76

Query: 64  VPWAVTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAY 123
           V      + +GRR ++L G+    +       A   W LV  RAL G+  A   ++ +A 
Sbjct: 77  VSVGRLGDLMGRRKLLLAGIALFTLASAVCGLAPSLWLLVAGRALQGLGAAIMMALTLAL 136

Query: 124 MVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVA 183
           + E +  +  G A+G     +++G   G   GG+L    GW    +      LL   L  
Sbjct: 137 VGETVDQEKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPLGLLTLGLAW 196

Query: 184 YLLPIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAML-----IGGVNFALFVNLYSVMGF 238
           Y LP+++      G  F     L+  +   T  L+M       GG+N AL   L +++G 
Sbjct: 197 YSLPVREVPPKPEGTRFDVTGTLLLAVTLATYALSMTSGRGSFGGLNLALL--LIALVGG 254

Query: 239 RLVAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALI 298
            L     S  +     + V      +S  +T       SA+   ++ A + +    +++ 
Sbjct: 255 GLFIRAQSRAVSPLIPLKVFRDRSLVSGLVT-------SALVATVMMATLLVGPFYLSIT 307

Query: 299 EAIPAMLVGLIL 310
            A+PA  VGL L
Sbjct: 308 LALPAAFVGLAL 319