Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., MFS transporter from Pseudomonas fluorescens FW300-N2C3

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 87/345 (25%), Positives = 141/345 (40%), Gaps = 44/345 (12%)

Query: 17  AFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRR 76
           AFG   +  + YL  P  P +A  F   E  I    AA  L LS+  + +   ++  GRR
Sbjct: 14  AFGPLAI--DFYL--PAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADRFGRR 69

Query: 77  LVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKA 136
           + +LTG+    +  LA  YA    +L+  R +  +   A   ++ A + ++       K 
Sbjct: 70  IPLLTGVGLFTLASLACAYAPNLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVGSAKV 129

Query: 137 IGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLP--IQQHF-- 192
               +    L  I   + GGLL +  GWQ   +A+ +F+ L +  VA  LP  +  H   
Sbjct: 130 FSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTVFSALASTAVALWLPESLPDHVPR 189

Query: 193 KPQRGLFFHHNRALVKHLQNRTLWLA-MLIGGVNFA-----------LFVNLYSVMGFRL 240
           +P  G    + R L       +++L   L GG+  A           +F+ LY V     
Sbjct: 190 QPLSGALRQYGRLLTD-----SVYLGHALTGGIAIAGMFAYIAGSPFVFIKLYGV----- 239

Query: 241 VAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRF--SAIPGMMLGALISMAGMLIALI 298
            AE +    G  +  F+  L   ++++L +     F  S    + LGA +S    L+A+ 
Sbjct: 240 PAEHFGWLFGTNAAGFI--LVAQVNARLLSKRGPAFLLSRAVWVYLGAGLS----LLAVS 293

Query: 299 EAIPAMLVGLI------LISFGAFFTHTLAYAWVSQKATQAKATA 337
              PA L  L+      + S G    +  A A   Q A    A+A
Sbjct: 294 SLQPAQLWPLLVPLFICIASLGCILPNASACAMNGQGARAGSASA 338