Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., MFS permease protein from Pseudomonas fluorescens FW300-N1B4

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 98/395 (24%), Positives = 171/395 (43%), Gaps = 11/395 (2%)

Query: 14  FALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAV 73
           FA+A G  L   N+Y  QP+L  +A+ FA+    I  +   + +   + L+      + +
Sbjct: 15  FAVACG--LAVGNVYYAQPLLDAMADAFAMEPATIGIVVTLTQIGYGVGLLLLVPLGDLL 72

Query: 74  GRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAF 133
            RR +++       +  L + +A    +L+L  AL G+ LA    V VAY      P   
Sbjct: 73  NRRRLIVVQTLLSALALLMIGFASNSIWLLLGMALTGL-LAVVTQVLVAYAATLAIPAQR 131

Query: 134 GKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFK 193
           G+ +G   +   +G +  R   G + D  GW+   +  A  TL+ ALL+  +LP  +  +
Sbjct: 132 GRVVGVITSGIVVGILLARTVAGGMADLAGWRSIYLLSAGLTLVMALLLFRVLPRHEDPR 191

Query: 194 PQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYSLPIGIAS 253
           P                +   L    ++  + FA  + L++ +   L A P SL      
Sbjct: 192 PDSAYGALIGSVFTLFKEEPVLRQRAMLALLTFASAMVLWTPLVLPLSAPPLSLSHTEIG 251

Query: 254 LIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGML-IALIEA-IPAMLVGLILI 311
           L  +   AG L++    +   R        L  L+ +A  L IAL ++ + A+L+G+I +
Sbjct: 252 LFGLAGAAGALAAARAGHLADRGLGQWTSGLSLLLMLASWLPIALTQSSLWALLLGVITL 311

Query: 312 SFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLG--GFYLLYCWQHGGWEMVT 369
             G    H  + + +     +A++  TA Y++ Y IG +LG  G   +Y W   GW  V 
Sbjct: 312 DLGLQAVHVTSQSMIYSVRPEAQSRLTAGYMLFYSIGSALGSIGSTAMYAW--AGWIGVC 369

Query: 370 LGGLGLYFILFILGW--RLSRQNKQTPQGSQALAS 402
             G G+  +  I  W      ++K   +G+  LA+
Sbjct: 370 WLGAGINAVALIYWWLTLAPTRSKSCGEGACTLAT 404