Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., putative export protein from Synechococcus elongatus PCC 7942

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 78/367 (21%), Positives = 152/367 (41%), Gaps = 40/367 (10%)

Query: 15  ALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVG 74
           A+  G+F+V+ + ++    LP +A HF V    + W+  A  LA+++ L+P    ++  G
Sbjct: 27  AVECGNFVVYMDGFIVTLALPAMARHFDVGLPILKWVVVAYLLAVTVTLLPAGRLADIWG 86

Query: 75  RRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFG 134
           R+ +++ G+  + +     + A     L+  R + G+      +  +A +      Q   
Sbjct: 87  RKRIVVIGMSVIFISAWLCMLAPTVKILIACRVIQGIGGGLVLANVMAEITAVFPKQDQR 146

Query: 135 KAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKP 194
           KA+    +  +L  +TG + GGL     GW+   + + + +LLG +L   +L ++   + 
Sbjct: 147 KAMAVNASVLALSQVTGLVLGGLFIVQFGWRSLFLIILLVSLLGLILSIGILKLRSRTQG 206

Query: 195 QRGLF--------------FHHNRALVKHLQNRTLWLAMLIGGVNFALFV--------NL 232
           +  L               F     L K+L N +  L + +G V   LFV         L
Sbjct: 207 RASLDWIGALLAIGATSAPFIFVEELSKNLLNPSSLLLLAVGVVALLLFVFVEQRVRQPL 266

Query: 233 YSVMGFRLVAEPYSLPIGIASLIFV----CYLAGTLSSKLTANWNRRFSAIPGMMLGALI 288
            ++  FR  +  ++     A+  FV    CY    L ++L    +   + +  + L   I
Sbjct: 267 LNLSLFR--SRAFTCGSASAAFYFVSAVSCYFFLPLYAQLVLGLSPVMAGVLLIPLSVAI 324

Query: 289 SMAGMLIALI----EAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVH 344
           ++  + I  +     A     +GL+ +S        +A   +S     A +TA    L+ 
Sbjct: 325 TVTSLTIGRLGNRFSARTLSTIGLLCVS--------VALLGLSSLGANASSTAIIAPLIL 376

Query: 345 YYIGGSL 351
             +GG L
Sbjct: 377 QGMGGGL 383