Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., multidrug resistance protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  238 bits (607), Expect = 2e-67
 Identities = 134/397 (33%), Positives = 215/397 (54%), Gaps = 13/397 (3%)

Query: 11  KVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTS 70
           ++ +AL   S +V+ NLYL Q MLP LA HF+V  +Q   + + ++ +L+  L+ +AV S
Sbjct: 14  RLMWALCVASVVVYINLYLMQGMLPLLAEHFSVPGSQATLILSVTSFSLAFSLLIYAVVS 73

Query: 71  EAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSP 130
           + +GR   ++  L+ + +  L +++ E F  LV  R L G+ LAA  ++A+AY  E+LSP
Sbjct: 74  DRIGRHTPIVVSLWLLALSNLLLIWVEDFNALVYVRFLQGILLAAVPAIAMAYFKEQLSP 133

Query: 131 QAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLP--- 187
               KA G YI ANS+GGI GR+ GG+++  L WQ ++  + + TL G  L  YLLP   
Sbjct: 134 STMLKAAGIYIMANSIGGIAGRLLGGVMSQFLSWQESMWLLFLVTLAGVALTNYLLPSGA 193

Query: 188 ---------IQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGF 238
                         + +R            HL +  + LA  IGG+ F + VN +S +  
Sbjct: 194 DAKVMSGGQTSSPSRSKRARLLQDFYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQL 253

Query: 239 RLVAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALI 298
            L+A PY      A+LIF+CY +GT++S  TA W  +F           + + G L+ L 
Sbjct: 254 HLMAAPYEWSRFQATLIFLCYSSGTVASYFTAKWLAKFGQHKLYQWSWCLMLLGSLLTLF 313

Query: 299 EAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLY 358
           +    + +G ++ + G F TH+   ++V+ +A++ +A AT+LYL  YY+G +LGG YL+ 
Sbjct: 314 DTTLTICMGFLMTACGFFLTHSCCNSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLML 373

Query: 359 CWQHGGWEMVTLGGLGLYFILFILGWRLS-RQNKQTP 394
            W    W+ V +G L L  ++ +   RL   Q K +P
Sbjct: 374 FWHKAEWQGVVMGSLTLLALIALSITRLRYHQTKMSP 410