Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 81/340 (23%), Positives = 143/340 (42%), Gaps = 24/340 (7%)

Query: 29  LFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRRLVMLTGLFAMPV 88
           ++ P LP +A +FAVS T  +   +   +A ++ +  W   ++ +GRR  ML GL    +
Sbjct: 23  IYSPALPNIAENFAVSVTSASQTLSVYFIAFAVGVFCWGRLADIIGRRNAMLAGLLCYAI 82

Query: 89  IGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKAIGGYIAANSLGG 148
                L    F  L+  R L     A  + +    M +  + +   K       +  +  
Sbjct: 83  GSACALMISDFTLLLFARVLSAFGAAVGSVITQTMMRDSYNGEELAKVFSVMGMSLGISP 142

Query: 149 ITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRGLFFHHNRALVK 208
           I G + G +L+   G+Q   VA+ +  ++   L    LP     KP+           +K
Sbjct: 143 IIGLLLGSILSAYWGYQGVFVALMVSAIVLLFLSVKSLP---ETKPEHTQKIAIVELAIK 199

Query: 209 HLQN-RTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYS-LPIGIASLI--FVCYLAGTL 264
            L +   +   +L+   N   F + +S+  F   A   S L  G + L+  F  +L G+ 
Sbjct: 200 MLTDIGIIKNTLLVASFNLMWF-SYFSLAPFMFEARGLSTLAFGASGLLLGFGAFL-GSY 257

Query: 265 SSKLTANWNRRFSAIPGMMLGALISMAGML---------IALIEAIPAMLVGLILISFGA 315
            +KL     R +S    + L +L+++ G L         I L      + + LI+I++G 
Sbjct: 258 FNKLLL--GRGYSCALLVRLASLMALFGGLGIWLFQSTNIGLNNVYFLLPMLLIVIAYGI 315

Query: 316 FFTHTLAYAWVSQKATQAKATATALYLVHYYI--GGSLGG 353
              + L+ A  + +A     +A AL+ + YYI  G  LGG
Sbjct: 316 AIPNILSSALANYRA--YAGSAGALFGLFYYILLGLGLGG 353