Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  161 bits (407), Expect = 2e-44
 Identities = 93/288 (32%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 8   MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67
           M  R +++F+ VAE  SFT AA  LH++QPALS  +++ E+ LG  LF R  R   LT  
Sbjct: 5   MLARHVQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDA 64

Query: 68  GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127
           G+V L +A+R  QQ+ +A+ A+ ++  + +G +RL       +Y    +I AF S +P +
Sbjct: 65  GDVYLLYARRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKI 124

Query: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRH 187
            + + E   + I  +LL+GELD G+  +     ++ A PLL+  +  VV + H LAE R 
Sbjct: 125 TLNLKEISQERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERS 184

Query: 188 LTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL 247
           +   +     L++  P +  R+ ID+  R H        E N L  ++ IV+     T L
Sbjct: 185 IGLQDLNAESLILLSPEFATREQIDRYFRTHAIHPQVQMEANALGAVIEIVRRTNLSTLL 244

Query: 248 LELVTSNEPEVKAIPFEPP-VWLDLALAWRKEGYLSNADRTFIEFVKK 294
              +     ++ AI  EP  +     L  RK+ + S A R FIE  K+
Sbjct: 245 PAKIALAHDDLVAIALEPERLQRTAVLMRRKDAFQSAAMRVFIEVAKE 292