Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  134 bits (337), Expect = 3e-36
 Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 6/286 (2%)

Query: 10  VRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEGE 69
           +R +R+ + VA+  +FT AA+ LH++QPALS  I++ E  LGV LF R  R V  T  G 
Sbjct: 15  LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74

Query: 70  VLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLKM 129
           V L+HA+R L +++  + A++++  + +G++RLG       Y    +I  F + +P + +
Sbjct: 75  VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134

Query: 130 TVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRHLT 189
            + E   + I   L+S  LD+ +        ++ + PL   Q+  V+ K     ++  LT
Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCLVMAKPAS-EKQAALT 193

Query: 190 FAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITALLE 249
             +       +  PG+  R  +D  C+   F      E N + ++L +V      T L +
Sbjct: 194 LEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILPD 253

Query: 250 LVTSNEP---EVKAIPFEPPVWLDLALAWRKEGYLSNADRTFIEFV 292
            +   +P   EV+ IP  P     +AL  RK GY S A + F + V
Sbjct: 254 AIVRKQPGLCEVQTIPALP--GRTVALLRRKNGYQSAAAKAFAKLV 297