Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., DNA-binding transcriptional regulator OxyR from Rahnella sp. WP5

 Score =  120 bits (300), Expect = 5e-32
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 4/293 (1%)

Query: 8   MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67
           M +R L + V +AE+  F  AA   H++QP LS  I+K E +LGV L +R  RKV  T  
Sbjct: 1   MNIRDLEYLVALAEFRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60

Query: 68  GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127
           G +L++ A+ +L++V   +    +    + G + +G    +G Y  PQII +    FP L
Sbjct: 61  GLLLVDQARTVLREVKVLKEMASQQGEAMSGPMHIGLIPTVGPYLLPQIIPSLHKTFPKL 120

Query: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRH 187
           +M + EA T  +   L SG+LD  ++      +     PL    M   +  +H  A R  
Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMRLAIYDDHPWASRDR 180

Query: 188 LTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL 247
           +  A+    +L+M + G+  RD     C +     D  F    L  + ++V     IT L
Sbjct: 181 VAMADLAGEKLLMLEDGHCLRDQALGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL 240

Query: 248 LELVTSNEPEVKAIPF----EPPVWLDLALAWRKEGYLSNADRTFIEFVKKYV 296
             L   NE     + +    +P     +AL +R    L        E +K+++
Sbjct: 241 PSLAVPNERSRDGVTYLMCDKPEPRRTIALVYRPGSPLRGRYEQLAEAIKEHM 293