Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 2e-30
 Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 8/286 (2%)

Query: 10  VRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEGE 69
           ++ L +F+T+ E  +FT AA++  I QP LS  I++ E+ LG  L  R+ +K+ LT  G 
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGI 64

Query: 70  VLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLKM 129
           +L   A+ IL Q +  Q  +  L G+  G +RLG   MM S     ++ AF+  +P +++
Sbjct: 65  LLENSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSSLII-DLLTAFRQQYPGIEL 123

Query: 130 TVIEAGTQSIRRMLLSGELDI---GVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERR 186
            + E G     + LL+  LDI    +   HD+  +LA   L    ++A + K+H LA++ 
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHDI--ELANRALTRYPLLACLPKDHALAQQE 181

Query: 187 HLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITA 246
            +T+ +F  +  +++   +     I ++  +     + +F +     + ++V+ +  +  
Sbjct: 182 AVTWQDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGVAI 241

Query: 247 LLELVTS--NEPEVKAIPFEPPVWLDLALAWRKEGYLSNADRTFIE 290
           L E +       E+   P  P +  DLAL WRK+  L+ A +  ++
Sbjct: 242 LPEPICHKLQGSELVFKPIRPNLTWDLALIWRKDLPLTPAAQALLD 287