Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (301), Expect = 4e-32
 Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 4/288 (1%)

Query: 10  VRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEGE 69
           ++ L+ F+T+ E E+FT AAQ+  I QP LS  I++ E+ LG TL  R+ +KV LT  G+
Sbjct: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64

Query: 70  VLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLKM 129
           +    A+ IL Q +  Q  +  L G+  G +RLG   MM S     ++ +++  +P +++
Sbjct: 65  LFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLII-GLLTSYRKRYPGVEL 123

Query: 130 TVIEAGTQSIRRMLLSGELDIG-VILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRHL 188
            + E G     + LL+  LDI    L      +L   PL    ++A + + H LA + +L
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYL 183

Query: 189 TFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITALL 248
           ++ +F  +  +++   +     I+++ R+     + +F +     + ++V+ +  +  L 
Sbjct: 184 SWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGLAILP 243

Query: 249 ELVTSNEPEVKAI--PFEPPVWLDLALAWRKEGYLSNADRTFIEFVKK 294
           E +       K +  P +P +  DLAL WR+   L+ A    +E  K+
Sbjct: 244 EPICQKLSNSKLVFRPMQPALTWDLALIWRQNLPLTPAANALLELSKQ 291