Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) from Pseudomonas fluorescens FW300-N2E2

 Score =  322 bits (825), Expect = 9e-93
 Identities = 167/347 (48%), Positives = 224/347 (64%), Gaps = 16/347 (4%)

Query: 17  PKANKPVVKKQQTKQPPTHKVQGEEVAAVKSGLHPRNRHRGQYDFPALIKVVPELQSHVM 76
           P+  KP   +Q+ K  P  K         K+ LHPRNRH+G+YDFPALIK  PEL   V+
Sbjct: 4   PRTPKPA--RQKPKSTPEAKTVAPRE---KASLHPRNRHQGRYDFPALIKSTPELAKFVI 58

Query: 77  KNPKGQWTINFADPISVKLLNKALLVLHYGVTYWDIPEGFLCPPIPGRADYIHRVADLLL 136
            NP G+ +I+FA P +V++ N+ALL   YG+ +WDIP  +LCPP+PGRADY+H +ADLL 
Sbjct: 59  INPYGKESIDFASPEAVRVFNRALLKAFYGIAHWDIPADYLCPPVPGRADYVHFLADLLA 118

Query: 137 KGNPQ--LNHSQVRALDIGVGANCIYPIVGVTEYGWSWVGSDVDPVSIQQASLIVQSNSK 194
             N       + V+ LDIG GANC+YP++G ++Y W ++GS++DP +I  A  IVQSN  
Sbjct: 119 SHNAGEIPRGAAVKVLDIGTGANCVYPLIGYSDYRWHFLGSEIDPTAIASAKAIVQSNG- 177

Query: 195 LQGHIECRLQKNSQHIFNGIIGANERYTVTTCNPPFHASLADAQQGTQRKLTNLQANQRK 254
           L   I+ R Q N + I  G++   ER+ +T CNPPFHASL +A +G+QRK        R 
Sbjct: 178 LNKAIQLRQQANRKQILLGLLEDTERFDLTMCNPPFHASLEEATKGSQRK-------WRA 230

Query: 255 KGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVESQQFAQQVLWFRTLISKGDNV 314
            G+ A P      LNFGGQ AELWC GGEA F+ ++  ES Q A QVLWF TL+SK  N+
Sbjct: 231 LGK-ADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGESAQLAGQVLWFSTLVSKASNL 289

Query: 315 RGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSFQNAEQRKLWWQAK 361
             ++  L+K GA    V+EM+QGQK SRF+AW+FQ   Q++ W QA+
Sbjct: 290 PAIQTALKKAGALHSQVVEMSQGQKQSRFVAWTFQTEAQQQAWRQAR 336