Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Predicted SAM-dependent methyltransferase from Pseudomonas stutzeri RCH2

 Score =  331 bits (849), Expect = 1e-95
 Identities = 163/317 (51%), Positives = 217/317 (68%), Gaps = 11/317 (3%)

Query: 43  AAVKSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLV 102
           A  K+ LHPRNRH G+YDFPALI   PEL  HV+ NP G+ +I+FA+P +V++ N+ALL 
Sbjct: 15  AEAKAVLHPRNRHTGRYDFPALIAGCPELAEHVIINPYGKQSIDFANPDAVRVFNRALLR 74

Query: 103 LHYGVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQL--NHSQVRALDIGVGANCIY 160
             YG+ +WDIP G+LCPP+PGRADY+H +ADLL + +       + + ALDIG GANCIY
Sbjct: 75  QFYGIQHWDIPPGYLCPPVPGRADYLHGLADLLAQNDASAIPRGTAIHALDIGTGANCIY 134

Query: 161 PIVGVTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANER 220
           P++G  EYGW + GSD+D  ++  A  IV +N  L   IE R Q   +HIF G++   +R
Sbjct: 135 PLIGHREYGWRFTGSDIDATALASAHTIVSANG-LAKAIELRQQAAPKHIFKGMVLPEDR 193

Query: 221 YTVTTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCP 280
           + +T CNPPFHAS A+A  G+QRK  NL       G+L  P+     LNFGGQ AELWC 
Sbjct: 194 FDLTLCNPPFHASQAEASSGSQRKWRNL-------GKL-DPSRKLPALNFGGQAAELWCE 245

Query: 281 GGEAAFIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKI 340
           GGEAAF+ +MA ES  FA QV WF TL+SKG NV  ++ +L++LGA+ +H ++MAQGQK 
Sbjct: 246 GGEAAFVARMAEESALFAGQVYWFSTLVSKGANVAPLEARLKRLGARQVHTLDMAQGQKK 305

Query: 341 SRFIAWSFQNAEQRKLW 357
           SRF+AW+F    ++  W
Sbjct: 306 SRFVAWTFLTEAEQATW 322