Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  268 bits (685), Expect = 1e-76
 Identities = 140/303 (46%), Positives = 189/303 (62%), Gaps = 5/303 (1%)

Query: 48  GLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVLHYGV 107
           G HP N HR  YDF AL+   P L+  V  N  G  +I+FA P +VK LN ALL  HYG+
Sbjct: 20  GPHPDNAHRDGYDFSALVASHPPLKPFVRANAYGNLSIDFALPEAVKALNCALLKHHYGI 79

Query: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQLNHSQVRALDIGVGANCIYPIVGVTE 167
           + WDIP+GFLCPPIPGR DY+H + D LL+  P      +  LDIG GAN IY ++  + 
Sbjct: 80  SRWDIPKGFLCPPIPGRVDYLHHLED-LLRQTP--GTDGLPLLDIGTGANGIYALLAASR 136

Query: 168 YGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERYTVTTCN 227
           +G + V +D+   S+   + I+++N  L+  I  R Q N +HI  G+   NE++    CN
Sbjct: 137 FGRAVVATDIAKASLTNVATILKANPGLEKRISLRFQSNPRHILTGVTQTNEQFAACVCN 196

Query: 228 PPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFI 287
           PPFHAS A+A  GT RKL  L A  R +  ++ P    + LNFGGQ AELWC GGE +F+
Sbjct: 197 PPFHASAAEAALGTNRKLEGL-AKSRGQRHISGPGKPQT-LNFGGQDAELWCDGGERSFL 254

Query: 288 GKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWS 347
            ++  ES +     +WF TL+SK DN+R  K++LE+ GA  I VIEM QGQKI+R +AW 
Sbjct: 255 LRLIDESARLPDLCVWFTTLVSKSDNLRPCKRRLEQRGASEIKVIEMQQGQKITRILAWR 314

Query: 348 FQN 350
           F++
Sbjct: 315 FES 317