Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase from Klebsiella michiganensis M5al

 Score =  314 bits (804), Expect = 2e-90
 Identities = 160/312 (51%), Positives = 203/312 (65%), Gaps = 13/312 (4%)

Query: 44  AVKSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVL 103
           A K GLHPRNRH+ +YD PAL +  PELQ  +  NP G+ TI+FA+P++VK LNKALL  
Sbjct: 3   AQKPGLHPRNRHQQRYDLPALCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALLAH 62

Query: 104 HYGVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQLNHSQVRALDIGVGANCIYPIV 163
            Y V +WDIP+GFLCPP+PGRADY+H +ADLL   +  +  +    LDIGVGANCIYP++
Sbjct: 63  FYAVKHWDIPDGFLCPPVPGRADYLHHLADLLAL-DSGIIPANASILDIGVGANCIYPLI 121

Query: 164 GVTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERYTV 223
           GV EYGW + GS+V+  +   A  IV  N  L   I  R QK+++ I  GII  NE Y  
Sbjct: 122 GVHEYGWRFTGSEVNADAFASAQAIVNGNPGLTRQIRLRRQKDAKAILTGIIHKNETYDA 181

Query: 224 TTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGE 283
           T CNPPFH S A AQ G +RK  NL   +             S LNFGGQ+ ELWC GGE
Sbjct: 182 TLCNPPFHDSAASAQAGGERKRRNLGLGE------------ESVLNFGGQQQELWCEGGE 229

Query: 284 AAFIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRF 343
            AFI +M  ESQQF +QV WF +L+S+GDN+  + + L  +GA  +   EMAQG K SRF
Sbjct: 230 VAFITQMIQESQQFGRQVKWFTSLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGNKQSRF 289

Query: 344 IAWSFQNAEQRK 355
           IAW+F +  +R+
Sbjct: 290 IAWTFMDEAKRR 301