Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  323 bits (828), Expect = 4e-93
 Identities = 158/342 (46%), Positives = 219/342 (64%), Gaps = 7/342 (2%)

Query: 16  KPKANKPVVKKQQTKQPPTHKVQGEEVAAVKSGLHPRNRHRGQYDFPALIKVVPELQSHV 75
           KP   K + K Q TK     K++ +     +  LHPRN H   YDFPAL+   P+L++ V
Sbjct: 22  KPSTPKSLAKPQTTKPKTASKLKAKH--GEQKRLHPRNLHINGYDFPALMASFPKLKAFV 79

Query: 76  MKNPKGQWTINFADPISVKLLNKALLVLHYGVTYWDIPEGFLCPPIPGRADYIHRVADLL 135
              P G  +I+FADP +VK LN ALL  HYG+ +WDIP+G LCPPIPGR DY+H +ADLL
Sbjct: 80  RPTPYGALSIDFADPFAVKNLNAALLKHHYGLAFWDIPKGALCPPIPGRVDYLHYLADLL 139

Query: 136 LKGNPQLNHSQVRALDIGVGANCIYPIVGVTEYGWSWVGSDVDPVSIQQASLIVQSNSKL 195
            +G      + + ALDIG GAN +Y I+G   Y W +V SD++P S+     I+ +N  L
Sbjct: 140 FEGAKVKRAAAIHALDIGTGANGVYAILGHQVYDWQFVASDINPQSLINVQRIIDNNPSL 199

Query: 196 QGHIECRLQKNSQHIFNGIIGANERYTVTTCNPPFHASLADAQQGTQRKLTNLQANQRKK 255
           QGH+  R Q++ + +F GII A++R+ +T CNPPFH SL +A +G+ RK+ NLQ N+ ++
Sbjct: 200 QGHLSLRRQQDDKAVFKGIIQASDRFELTLCNPPFHGSLKEASEGSLRKVRNLQLNRGEQ 259

Query: 256 GRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVESQQFAQQVLWFRTLISKGDNVR 315
                P  + + LNFGGQ AELWC GGE  F+  M  ESQ FA+Q LWF +L+SK +N++
Sbjct: 260 -----PKATSATLNFGGQAAELWCQGGEKQFLATMIRESQAFAEQCLWFTSLVSKQENLK 314

Query: 316 GMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSFQNAEQRKLW 357
              + LEKLG  ++  IEM QG K++R +AWSF +  +R  W
Sbjct: 315 PCYQALEKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAKRLQW 356