Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., fimbrial biogenesis and twitching motility protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  151 bits (381), Expect = 1e-41
 Identities = 83/236 (35%), Positives = 135/236 (57%), Gaps = 9/236 (3%)

Query: 7   LGLIIALAGCVT--VTETAGNATQS-------DPTEMAEARIALGLGYLENGSMIKAREN 57
           L LI  L+G VT  VTE   + T         D    A+ R  LGL YL+ G+  +A+ N
Sbjct: 8   LTLIAILSGLVTGCVTEQTYSGTDIPVSERTFDKVAAAKERTQLGLTYLQRGNTEQAKFN 67

Query: 58  LEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQG 117
           L+KA+ +AP      ++MA++Y+ VG+     + YR A+  +  +G+ +NNFG FLC+Q 
Sbjct: 68  LDKAMAYAPHLEEVHVAMAYFYQTVGDVPRTEEAYRNAVRSNDASGDSMNNFGVFLCQQK 127

Query: 118 EYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSIL 177
            Y  A++ F +A+ QP Y   ++SYEN GLC+  AG+ + AR YF  A+ +DP R  S+L
Sbjct: 128 RYGEAEEMFLKAINQPKYTRTASSYENLGLCSRDAGQIEKARHYFDMALKYDPRRATSLL 187

Query: 178 QLTKMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLL 233
           ++T++ +++ D+  A+  L  L+       +SL L +E+E++  N     +Y  +L
Sbjct: 188 EMTEIAMDSKDFQGAKRMLERLHSVIPESASSLALGVEIERQLNNRDASSRYGIML 243