Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., type IV pilus biogenesis/stability protein PilW (RefSeq) from Shewanella loihica PV-4

 Score =  156 bits (395), Expect = 3e-43
 Identities = 81/226 (35%), Positives = 137/226 (60%), Gaps = 5/226 (2%)

Query: 13  LAGCVTVTETAGNATQS-----DPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
           ++GCVT    +G          D    A  R+ LGL YL+ G+  +A+ NL+KAL+ AP+
Sbjct: 19  MSGCVTERTYSGTDVPVQERTFDNVSAARQRVQLGLTYLQKGNSEQAKYNLDKALEFAPN 78

Query: 68  YYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFR 127
                +++A+YY++VGE +   K YR A++    +G+ +NNFG FLC+Q +YD A++ F 
Sbjct: 79  IEDVHVALAYYYQSVGELELTEKAYRNAINASDASGDSMNNFGVFLCQQAKYDQAEEMFL 138

Query: 128 RAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAG 187
           RAV+ P Y   ++SYEN G+C+ K+G    A+ YF+ A+++DP R  S+L+L+++E++ G
Sbjct: 139 RAVKMPKYTRSASSYENLGICSRKSGDLQKAQRYFEMALNYDPRRANSLLELSEIELDLG 198

Query: 188 DYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLL 233
           +Y+ A+  L   ++       SL L I++E+   +    +K+  LL
Sbjct: 199 NYSAAKKGLARYHRVVPESAQSLALGIKIEQGLNDPEAMRKFGILL 244