Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  158 bits (400), Expect = 9e-44
 Identities = 82/232 (35%), Positives = 137/232 (59%), Gaps = 5/232 (2%)

Query: 7   LGLIIALAGCVTVTETAG-----NATQSDPTEMAEARIALGLGYLENGSMIKARENLEKA 61
           + L + + GCVT     G     +  + D    A  R+ LGL YL  G+  +A+ NL+KA
Sbjct: 12  IALSLTVTGCVTERTYTGTDIPVSERKLDRVAAARERMQLGLTYLNRGNSEQAKYNLDKA 71

Query: 62  LQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDT 121
           +++AP+     ++MA+YY+ VG+     + Y+ A++    +G+ +NNFG FLC+Q +YD 
Sbjct: 72  IEYAPELEDVHVAMAYYYQTVGDLVRTERAYQDAINTKDASGDSMNNFGVFLCQQKQYDK 131

Query: 122 ADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTK 181
           A++ F  A+E P Y   ++SYEN GLC+  AG+ + AR+YF+ A+ +DP R +S+L+L +
Sbjct: 132 AEKMFLAAIEMPKYTRTASSYENLGLCSRDAGRAEKARQYFQMALKYDPRRSVSLLELVE 191

Query: 182 MEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLL 233
           + +  GDY  AR +L   +Q       SL L I++E+   + A  +++  LL
Sbjct: 192 LGMNKGDYIDARNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFGILL 243